CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS2_METJA (Putative 26S protease regulatory subunit homolog MJ1494 OS=Methanocaldococcus jannaschii GN=MJ1494 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 56/160 (35.00%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 42 LETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAK 518 LE F P+ VLF GPPGTGKT AR +A + + V ++ ++ G++ +++ +++ A+E I+F+DE+D+ ++R+ + + +++ LL ++DG ++++ VV IAATN LDPA+ SRF+ I F LP+ E R +I YAK Sbjct: 143 LENPKLFGEWAPKNVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAP-CIVFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAIRSRFEEEIEFKLPNDEERLKIMELYAK 301
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 69/186 (37.10%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI----AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ VL GPPGTGKT AR IA+ + V ++ KY GES R++ ++F A + +IF+DE+D+ R SE A R R L LL Q+DGF+ KV +I ATNR LDPAL+ R D I LP+ R ++ AA KH + D+R+VC +A Sbjct: 171 PKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARD-HQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKH-GDVDYEAIAKLADGFNAADLRNVCTEA 354
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF---EQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PR VL GPPGTGKT AR +AN+ G + + ++SK+YGE+E L ++F+ A L + +IIF+DE+D+ R+ +E +R+++ LL +DG + +V+V+ ATNR LD AL RFD I G+P+ ++R +I Sbjct: 387 PRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEAT-LRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDI 532 HSP 2 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM--HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ VL GPPG KT A+ +AN++G+ + + +M+KY GESER + + F A + +IIF DE+D+ AV R S + R+L+ LL ++DG EQ K V ++AATNR +D AL+ R D +I LPD R+EI Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVA-PSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREI 805
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEI 500 P+ +L GPPG GKT A+ +A ++ V + + SKY G+ E+L+ +F++A +IIF+DE+DS R S EA+RR+ + +L Q DG D++V+V+ ATNR +DLD A + R I GLP+ E R +I Sbjct: 417 PKGLLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHF-QPSIIFIDEIDSLLTERSSNESEASRRLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALRRLVKRIYVGLPELETRLQI 559
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 73/226 (32.30%), Postives = 109/226 (48.23%), Query Frame = 3 Query: 15 SPEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYA--KHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQACL 671 +PE+++ + + P+ VL GPPGTGKT A+ +A + + V ++ K+ GE +L+ VF LA E + IIF+DE+D+ A R + R R L LL ++DGF+ V +IAATNR LDPA++ RFD +I PD + R EI + + M G DI+ VC +A + TKD ++A L Sbjct: 170 NPELFEKVGIVP--------PKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKE-KSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNIKSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALL 386
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS2_METTH (Putative 26S protease regulatory subunit homolog MTH_1011 OS=Methanobacterium thermoautotrophicum GN=MTH_1011 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 63/187 (33.69%), Postives = 100/187 (53.48%), Query Frame = 3 Query: 42 LETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAV-ARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRD 590 LE +F PR VLF G PGTGKT A+ +AN+ VPL + ++ ++ G+ R + +++ LA++ ++IF+DE+D+ + R + +++ LL ++DG Q+ VV I ATN + LD A+ SRF+ I F LPD E R+ + +Y + MSGRDI+D Sbjct: 146 LEDPDRFRDWAPRNVLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTA-PSVIFIDEMDAIGLDRRYQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAIRSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDIKD 331
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 3 Query: 15 SPEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 +PE++ + ++ P+ VL GPPGTGKT A+ +A G ++ P ++ KY GES R++ ++F+ A E IIF+DEVD+ R SE A R R L LL Q+DGF+ + +I ATNR LDPAL+ R D + LP+ R EI Sbjct: 203 NPEIFQRVGIKP--------PKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKE-HEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEI 360
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +F++A EL +IIF+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 341 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 479
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +F++A EL +IIF+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 374 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 512
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +F++A EL +IIF+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 376 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 514 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |