CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGFEQD--------KKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQ---EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKD 653 + VL GPPGTGKT A+ +A + G V + SK+ GESER++ +F LA + IF+DE+DS +R S HE++RR+ S LL Q+DG K V+V+AATN D+D AL R + I LPD E+R+ I + + SG D+ +VC+ A + + I G+ T+D Sbjct: 273 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYA-PSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGK-TRD 474
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 70/198 (35.35%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRG 638 + VL GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A IF+DE+DS R S+ HEA+RR+ S LL Q+DG + K V+V+AATN D+D AL R + I LP + R E I + + SG DI +VC+ A + I G Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRING 438
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 70/198 (35.35%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRG 638 + VL GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A IF+DE+DS R S+ HEA+RR+ S LL Q+DG + K V+V+AATN D+D AL R + I LP + R E I + + SG DI +VC+ A + I G Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRING 438
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 70/198 (35.35%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRG 638 + VL GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A IF+DE+DS R S+ HEA+RR+ S LL Q+DG + K V+V+AATN D+D AL R + I LP + R E I + + SG DI +VC+ A + I G Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRING 438
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN--GAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PR VL GPPG GKT + +A +AG L+ V + GE+E + +VF A EL + +++FLDE+D+ R S E+ R+++ +L +DG D++VVV+ ATNR LDPAL RFD + G P + R+EI Sbjct: 234 PRGVLLAGPPGVGKTQLVQAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAPES--RVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEI 377 HSP 2 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 64/204 (31.37%), Postives = 96/204 (47.06%), Query Frame = 3 Query: 72 RPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMH--EATRRILSVLLRQIDG-----------------FEQ--DKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 +P+ VL GPPG KT+ R +A + V + S + G+SE++L ++F A AI+FLDE+DS AR + + R+LSVLL ++DG F++ ++ V++IAATNR LD AL+ R D +I PDH+ R I K SG D+R++C +A Sbjct: 497 QPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQA-RASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEA 699
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKK-VVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 PE+Y+++ ++ P+ V+ G PGTGKT A+ +ANQ + V ++ KY G+ RL+ ++F+ A E + +I+F+DE+D+ R A R R + LL Q+DGF+ ++ + VI ATNR DLDPALI R D I F PD +++I Sbjct: 214 PELYEEMGIKP--------PKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEE-HSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKI 371
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 69/198 (34.85%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWASKIIRG 638 + VL GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A IF+DE+DS R SE HEA+RR+ + LL Q+DG + K V+V+AATN D+D AL R + I LP + R+E+ + M SG DI +VC+ A + I G Sbjct: 244 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIEG 440
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 67/231 (29.00%), Postives = 110/231 (47.62%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMS---GRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQE 686 PE+++ + +E P+ +L GPPGTGKT A+ +A + + V ++ K+ GE L+ +F LA E +IIF+DE+D+ A R + R R L LL ++DGF+ V +I ATNR LDPA++ RFD +I PD + R EI + + G +++ +C +A + A + +R +T D + + + E Sbjct: 193 PELFEKVGIEP--------PKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKE-KAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMN-AIRELRDYVTMDDFRKAVEKIME 413
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NVL_MOUSE (Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLA-NELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH 521 P +L GPPG GKT A+ +AN++G+ + V +++ Y GESER + +VF A N P +IF DEVD+ R A+ R+++ LL ++DG E ++V ++AATNR +DPA++ R D + GLP +R I K+ Sbjct: 614 PAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAP--CVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKN 763 HSP 2 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 61/167 (36.53%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLA-NELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ---DKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PEVY + + PR VL GPPG GKT A IA + +P++ V ++S GESE+ L ++F A + P I+F+DE+D+ R+ + RRI++ LL +D +V+VI ATNR LDPAL RFD + G+PD R+ I Sbjct: 286 PEVYQHLGVVP--------PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAP--CIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERI 442
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NVL_HUMAN (Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 57/152 (37.50%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLA-NELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH 521 P VL GPPG GKT A+ +AN++G+ + V +++ Y GESER + +VF A N P +IF DEVD+ R A+ R+++ LL ++DG E ++V ++AATNR +DPA++ R D + GLP +R I K+ Sbjct: 615 PAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAP--CVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN 764 HSP 2 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 63/167 (37.72%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLA-NELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ---DKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PEVY + + PR VL GPPG GKT A IA + +P++ V ++S GESE+ L ++F A + P IIF+DE+D+ R+ + RRI++ LL +D +V+VI ATNR LDPAL RFD I G+PD +R+ I Sbjct: 287 PEVYHHLGVVP--------PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAP--CIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERI 443 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |