CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH 521 K + P VL EGPPGTGKT A+ +A +AGVP + + + G + +F A + AIIF+DE+D+ R + ++ + L+ LL ++DGFE ++ ++VIAATNR LDPAL+ RFD + G PD + R+ I +AK+ Sbjct: 214 KLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAA-PAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH 521 K + P VL EGPPGTGKT A+ +A +AGVP + + + G + +F A + AIIF+DE+D+ R + ++ + L+ LL ++DGFE ++ ++VIAATNR LDPAL+ RFD + G PD + R+ I +AK+ Sbjct: 214 KLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAA-PAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ VL GPPGTGKT AR IA +AGVP + G R + +FS A + + IIF+DE+D+ +R+ + + + L+ +L ++DGF+Q++ ++V+AATN + LD AL+ RFD I PD E R++I Sbjct: 260 PKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKC-SPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 402
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 60/147 (40.82%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEM--HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ L GPPGTGKT AR A Q + + ++ Y GE +L+ F+LA E IIF+DE+D+ R DSE +R + LL Q+DGF D +V V+AATNR LDPAL+ R D I F LP ++R +I Sbjct: 215 PKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKE-KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQI 360
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 69/198 (34.85%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRG 638 + VL GPPGTGKT A+ +A + G V + SKY GESE+L+ +F +A IF+DE+DS R S+ HEA+RR+ S LL Q+DG + K V+V+AATN D+D AL R + I LP + R + I + + SG DI +VC+ A + I G Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRING 438
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ VL GPPGTGKT AR IA +AGVP + G R + +F+ A + + IIF+DE+D+ +R+ + + + L+ LL ++DGF+Q++ ++VIAATN + LD AL+ RFD I PD E R++I Sbjct: 263 PKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKR-SPCIIFMDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQI 405
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDG--FEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEI 500 PR VL GPPGTGKT A+ IA+QA + + SK+ G++E+L+ +F++A AIIF+DEVDS R + +E+T R+ + L +DG ++ +V+VI ATNR Q+LD A+ RF + LP E RQ+I Sbjct: 283 PRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVA-AAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKI 425
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 65/148 (43.92%), Postives = 79/148 (53.38%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFG-LPDHENRQEI 500 PR VL GPPGTGKT + +AN + V + KY GE R++ VF LA E +IIF+DEVDS A R + +RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D I F L D R+ I Sbjct: 206 PRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARE-NAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLI 352
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 63/206 (30.58%), Postives = 105/206 (50.97%), Query Frame = 3 Query: 12 SSPEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 ++PE+Y ++ ++ P+ V+ G PGTGKT A+ +ANQ + V ++ +Y GE +L+ ++F +A ++ +IIF+DE+D+ R S +R + LL Q+DGF+ + VI ATN+ + LDPALI R D I FG+PD +++I + +SG DI+ +C +A Sbjct: 190 TNPELYQEMGIKP--------PKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVA-DMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEA 386
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 60/187 (32.09%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 42 LETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAV-ARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRD 590 LE +F PR VLF G PGTGKT A+ +AN+ VPL + ++ ++ G+ R + +++ LA++ ++IF+DE+D+ + R + +++ LL ++DG Q+ VV I ATN + LD A+ SRF+ I F LP + R+ + +Y + MSGRDI++ Sbjct: 146 LEDPDRFRDWAPRNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTA-PSVIFIDEMDAIGLDRRFQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAIRSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKE 331 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |