CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 74/186 (39.78%), Postives = 99/186 (53.23%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI----AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ VL GPPGTGKT AR IA+ + V ++ KY GES RL+ ++F+ A E IIF+DE+D+ R SE A R R L LL Q+DGF+ KV +I ATNR LDPAL+ R D I LP+ ++R +I AA AKH +G D+R++C +A Sbjct: 173 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYARE-HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKH-GEIDYEAIVKLAEGFNGADLRNICTEA 356
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 65/151 (43.05%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPG+GKT AR +AN+ G + +MSK GESE L K F A E +IIF+DE+DS A R+ E RRI+S LL +DG + V+VI ATNR +DPAL RFD I G+PD R E+ + K+ Sbjct: 242 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN 391 HSP 2 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 70/210 (33.33%), Postives = 106/210 (50.48%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQ 662 KF + + VLF GPPG GKT A+ IAN+ + V +++ ++GESE + ++F A + ++F DE+DS A R S + + A R+L+ LL ++DG K V +I ATNR +DPAL+ R D +I LPD ++R +I + + SG DI ++CQ+A IR I KD E+ Sbjct: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ-SAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRA----CKYAIRENIEKDIER 713
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23 Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEAT------RRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PE+++ + +E P+ VL GPPGTGKT A+ +AN A + + ++ K+ GE RL+ ++F LA E +IIF+DE+D+ R M +AT +R L+ LL ++DGF+ + VIAATNRK LDPAL+ RFD I LPD E R EI + + SG DI+ +C +A Sbjct: 202 PELFEKVGVEP--------PKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELARE-KAPSIIFIDEIDAIGARR---MRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEA 396
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23 Identity = 65/184 (35.33%), Postives = 100/184 (54.35%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLAN-ELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFE--QDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM----SGRDIRDVCQQA 605 P+ VL GPPGTGKT R +A+QA + + SK+ GE E+L+ +FS+A +LP ++IF+DE+DS AR HE++RRI + L Q+DG D++++V+ ATNR Q+LD A RF + LP+ ++R +I + + SG D+R +C +A Sbjct: 349 PKGVLLFGPPGTGKTMIGRCVASQAQATFFNISASSLTSKWVGEGEKLVRALFSVARLKLP--SVIFIDEIDSLLSARSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRLYIALPEPDSRTQIVENLLRGTRHEITDHNLEKIRRLTDGYSGADMRQLCTEA 530
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23 Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPG+GKT AR +AN+ G + +MSK GESE L K F A E +IIF+DE+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD I G+PD R E+ + K+ Sbjct: 242 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKN 391 HSP 2 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 69/210 (32.86%), Postives = 105/210 (50.00%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQ 662 KF + + VLF GPPG GKT A+ IAN+ + V +++ ++GESE + ++F A + ++F DE+DS A R S + A R+L+ LL ++DG K V +I ATNR +DPAL+ R D +I LPD ++R +I + + SG D+ ++CQ+A IR I KD E+ Sbjct: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ-SAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRA----CKYAIRENIEKDIER 713
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23 Identity = 66/151 (43.71%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 PR +L GPPGTGKT AR +AN+ G + +MSK GESE L K F+ E + AI+F+DE+D+ A R+ E +RI+S LL +DG + VVVIAATNR +D AL RFD I G+PD R EI + K+ Sbjct: 243 PRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC-EKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 392 HSP 2 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 65/214 (30.37%), Postives = 105/214 (49.07%), Query Frame = 3 Query: 45 ETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQ 662 E KF R VLF GPPG GKT A+ IAN+ + + +++ ++GESE + VF A ++F DE+DS A AR + + A R+++ +L ++DG K V +I ATNR +DPA++ R D +I LPD +R +I + + SG D+ ++CQ+A + + I +I ++ E+ Sbjct: 506 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA-PCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKER 718
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFE--QDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 P+ +L GPPG GKT A+ +A+++ + + + SKY GE E+L+ +F++A EL +IIF+DEVDS R HEATRR+ + L + DG +++V+V+ ATNR Q+LD A + RF + LPDH R Sbjct: 407 PKGLLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDEVDSLLSERKDNEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALRRFTKRVYVTLPDHNTR 546
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 71/185 (38.38%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ---EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PR VL GPPGTGKT A+ +A+ + V + KY GE RL+ VF LA E + AIIF+DE+D+ A R A R RIL LL Q+DGF+ V VI ATNR+ LDPAL+ R D I F LPD ++ ++ +SG +I+ +CQ+A Sbjct: 184 PRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARE-NSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEA 367
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 78/223 (34.98%), Postives = 106/223 (47.53%), Query Frame = 3 Query: 21 EVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQA 665 E+Y I ++ PR VL GPPG GKT A+ +A + V + KY GE R++ VF LA E + +IIF+DE+D+ A R A R RIL LL Q+DGF+Q V VI ATNR+ LDPAL+ R D I F LPD ++ + + +SG DI +CQ+A + +TKD E+A Sbjct: 185 ELYQQIGIDP--------PRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE-NSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKA 398
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPG+GKT AR +AN+ G + +MSK GESE L K F A E +IIF+DE+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD I G+PD R E+ + K+ Sbjct: 241 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390 HSP 2 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 68/209 (32.54%), Postives = 102/209 (48.80%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGE 659 KF + + VLF GPPG GKT A+ IAN+ + V +++ ++GESE + ++F A + ++F DE+DS A R + + A R+L+ LL ++DG K V +I ATNR +D AL+ R D +I LPD ++R I + + SG DI ++CQ+A IR I KD E Sbjct: 508 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ-SAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRA----CKYAIRENIEKDIE 711 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |