CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPG+GKT AR +AN+ G + +MSK GESE L K F A E +IIF+DE+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD I G+PD R E+ + K+ Sbjct: 242 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 391 HSP 2 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 68/218 (31.19%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE---ATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQE 686 KF + + VLF GPPG GKT A+ IAN+ + + +++ ++GESE + ++F A + ++F DE+DS A R + + + A R+L+ LL ++DG K V +I ATNR +DPAL+ R D +I LPD E+R +I + + SG DI ++CQ++ + + I I K+ ++A P E Sbjct: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ-SAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAME 725
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPG+GKT AR +AN+ G + +MSK GESE L K F A E +IIF+DE+DS A R+ E RRI+S LL +DG + V+V+ ATNR +DPAL RFD I G+PD R E+ + K+ Sbjct: 241 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA-EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390 HSP 2 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 69/211 (32.70%), Postives = 103/211 (48.82%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR----DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQ 662 KF + + VLF GPPG GKT A+ IAN+ + V +++ ++GESE + ++F A + ++F DE+DS A R + A R+L+ LL ++DG K V +I ATNR +D AL+ R D +I LPD ++R I A + + SG DI ++CQ+A IR I KD E+ Sbjct: 508 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ-SAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRA----CKYAIRENIEKDIEK 713
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 67/151 (44.37%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 PR +L GPPGTGKT AR +AN+ G + VMSK GESE L K F E AI+F+DE+D+ A R+ E RRI+S LL +DG + +VVIAATNR +D AL RFD I G+PD R EI + K+ Sbjct: 244 PRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC-EKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 393 HSP 2 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 62/196 (31.63%), Postives = 96/196 (48.98%), Query Frame = 3 Query: 45 ETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR----DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI---AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 E KF R VLF GPPG GKT A+ IAN+ + + +++ ++GESE + VF A ++F DE+DS A AR + A+ R+++ +L ++DG K V +I ATNR +DPA++ R D +I LPD +R +I + + SG D+ ++CQ+A Sbjct: 507 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA-PCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRA 701
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 68/145 (46.90%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 PR VL GPPGTGKT A+ +AN + V + KY GE R++ VF LA E AIIF+DEVD+ A AR A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D I F LPD ++ Sbjct: 189 PRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE-NAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 332
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPGTGKT AR +AN+ G + V +MSK+YGESE+ + ++F A E +IIF+DE+D+ A R+ E +R+++ LL +DG + +V+VI ATNR +DPAL RFD I PD + R++I + ++ Sbjct: 246 PKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEE-NAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRN 395 HSP 2 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ +L GPPGTGKT A+ +A ++G + V ++SK+ GESE+ + ++F A + +IF DE+DS A R S T RI++ LL ++DG KVV+IAATNR LDPAL+ RFD +I PD R EI + K+ Sbjct: 521 PKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAA-PTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 71/186 (38.17%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI----AAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ L GPPGTGKT AR +A+Q + V ++ KY GES R++ ++F+ A + I+F+DE+D+ R SE A R R L LL Q+DGF+ KV VI ATNR LDPAL+ R D I GLP+ ++R EI + + KH S D+R+VC +A Sbjct: 184 PKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARD-HQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH-GEIDFEAVVKLSDGFSAADLRNVCTEA 367
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF---EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQ 494 + +L GPPG GKT AR +A + + + SKY G+ E+L+ +F++A EL +IIF+DEVDS R S HEATRR+ + L Q DG + ++VV+AATNR Q+LD A + RF + LPD + R+ Sbjct: 537 KGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVAREL-QPSIIFIDEVDSVLSERSSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALRRFPKRVYVTLPDRDTRE 677
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 68/185 (36.76%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE---MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ VL GPPGTGKT CAR +AN+ + V ++ KY GE R++ +F +A IIF DEVD+ AR + +R + L+ Q+DGF+ + V+ ATNR LDPAL+ R D + FGLPD E R I +AK +G DIR VC +A Sbjct: 204 PKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARS-KKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEA 387
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 68/185 (36.76%), Postives = 95/185 (51.35%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENR---QEIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ VL GPPGTGKT AR +A+Q + V ++ KY GE RL+ ++F LA + +IIF+DE+D+ R+ R R L LL ++DGF+ V ++AATNR LD AL+ RFD MI LPDH+ R +I QY +G D+R +C +A Sbjct: 187 PKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRA-PSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEA 370
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 65/184 (35.33%), Postives = 99/184 (53.80%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLAN-ELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFE--QDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY---AKH-XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ VL GPPGTGKT R +A+Q + + SK+ GE E+L+ +FS+A +LP ++IF+DE+DS +R HE++RRI + L Q+DG D++++V+ ATNR Q+LD A RF + LP+ E+R +I +H SG D+R +C +A Sbjct: 349 PKGVLLFGPPGTGKTMIGRCVASQCKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLP--SVIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSGADMRQLCTEA 530 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |