CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQ--AGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN--GA-----IIFLDEVDSFAVARDSE-----MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 + +L GPPG GKT AR I A P + E+ ++KY GESE + K+F+ A E GA II DE+D+ R S +H+ +++ LL +IDG EQ ++VI TNR +D AL+ R + + GLPD + R +I Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEI-LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT---VVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQI 406
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQ--AGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN--GA-----IIFLDEVDSFAVARDSE-----MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 + +L GPPG GKT AR I A P + E+ ++KY GESE + K+F+ A E GA II DE+D+ R S +H+ +++ LL +IDG EQ ++VI TNR +D AL+ R + + GLPD + R +I Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEI-LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT---VVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQI 406
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQ--AGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN--GA-----IIFLDEVDSFAVARDSE-----MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 + +L GPPG GKT AR I A P + E+ ++KY GESE + K+F+ A E GA II DE+D+ R S +H+ +++ LL +IDG EQ ++VI TNR +D AL+ R + + GLPD + R +I Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEI-LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT---VVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQI 406
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQA-GVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGA--------IIFLDEVDSFAVARDSEMHEAT--RRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 K N + +L GPPGTGKT AR I G V +++KY G+SE + +F A E+ A II DE+D+ +R S ++ +++ LL IDG E ++VI TNRK +D AL+ R + + LPD R++I Sbjct: 251 KLGVNHVKGMLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDA-EIEQKAKGDDSGLHIIIFDELDAICKSRGSRQGDSGVGDSVVNQLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQI 410
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQ--AGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPN--GA-----IIFLDEVDSFAVARDSE-----MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 + +L GPPG GKT AR I A P + E+ ++KY GESE + K+F+ A E GA II DE+D+ R S +H+ +++ LL +IDG EQ ++VI TNR +D AL+ R + + GLPD + R +I Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEI-LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT---VVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQI 406
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATD3B_XENLA (ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-B PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 3 Query: 33 DIALETR-CKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY 512 DIA+ TR K R +L GPPGTGKT A+ +A + + + V + E + KVF A G ++F+DE D+F R +E + E R L+ L + EQ K +++ A+N+ + D A+ R D ++ F LP E R+ + Y Sbjct: 326 DIAIATRNTKANKGLYRNILMYGPPGTGKTLFAKKLAMHSSMDYAIMTGGDV-APMGREGVTAMHKVFDWAGTSKRGLLLFVDEADAFLRKRSTEKISEDLRATLNAFLYRTG--EQSNKFMLVLASNQPEQFDWAINDRIDEIVHFDLPGLEERERLVRLY 484
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATD3A_HUMAN (ATPase family AAA domain-containing protein 3A OS=Homo sapiens GN=ATAD3A PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = 3 Query: 33 DIALETRCKFESNRP--RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY 512 DIA+ TR + NR R +L GPPGTGKT A+ +A +G+ + V + E + K+F AN G ++F+DE D+F R +E + E R L+ L + + K +++ A+N+ + D A+ R + M+ F LP E R+ + Y Sbjct: 378 DIAIATR-NTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDV-APMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTG--QHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMY 536
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: Y529_ATV (Uncharacterized protein ORF529 OS=Acidianus two-tailed virus PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNG--AIIFLDEVDSFAVAR------DSEMHEATRRILSVLLR--QIDGFEQDKKVVVIAATN-RKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAK 518 +L G PG GK+ A++I+ G+ ++ + +MSKY GESE+ + ++F E+P I+F+DEVD V R +IL+V L+ Q + E+ V+ IA TN R +DLD A RF I F P E + +Y K Sbjct: 112 ILLYGAPGMGKSELAKLISKWLGIGMIQKRADDIMSKYLGESEQNMARLFK--EEIPQNLPTIVFMDEVDWLGVRRRFGSTTADTASTTVGQILTVFLQLFQDEVIEKRLPVLFIATTNARLEDLDDAFKRRFPFKIYFTPPSQEMIEYFTDKYIK 265
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATD3B_HUMAN (ATPase family AAA domain-containing protein 3B OS=Homo sapiens GN=ATAD3B PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 3 Query: 33 DIALETRCKFESNRP--RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEI 500 DIA+ TR + NR R +L GPPGTGKT A+ +A +G+ + V + E + K+F AN G ++F+DE D+F R E+ + R L+ L + + K +++ A+N + D A+ SR D M+ F LP E R+ + Sbjct: 330 DIAIATR-NTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDV-APMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERL 484
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQ--AGVPLMYVPLEVVMSKYYGESERLLGKVFSLAN-------ELPNGAIIFLDEVDSFAVARDSEMHEAT--RRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 K N + +L GPPGTGKT AR I A P + E+ ++KY G+SE + K+F+ A E II DE+D+ R S + ++++ LL ++DG +Q ++VI TNRK +D AL+ R + + LPD R +I Sbjct: 298 KLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEI-LNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQI 457 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |