CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 66/166 (39.76%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 PE+++++ ++ P+ VL GPPG GKT A+ IA++ + V ++ KY GE RL+ ++F LA E IIF+DE+D+ R E R R L LL ++DGF+ V VIAATNR LDPAL+ RFD +I LPD E R EI Sbjct: 160 PELFEEVGIDP--------PKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKE-KAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEI 316
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/204 (35.29%), Postives = 102/204 (50.00%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQE---IAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PE++ ++ +E P+ VL GPPGTGKT A+ +ANQ + V + KY GE RL+ +VF LA E +IIF+DE+D+ A R D+ +R + LL ++DGF+ V VI ATNR LDPA++ RFD +I LP E R + I + K SG DI+ +C +A Sbjct: 164 PELFAEVGIEP--------PKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKE-KAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEA 358
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 71/183 (38.80%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQ 599 PR VL GPPG GKT A+ +A+ + V + KY GE R++ VF LA E AIIF+DE+D+ A R A R RIL LL Q+DGF+Q+ V VI ATNR LDPAL+ R D I F LPD ++ I + +SG DI +CQ Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE-NAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQ 380
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 64/198 (32.32%), Postives = 106/198 (53.54%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF---EQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMS----GRDIRDVCQQAERSWASKIIRGQ 641 PR +L GPPGTGKT AR +AN+ G + + ++SK+YGE+E L ++F+ A L + +IIF+DE+D+ R+ E +R+++ LL +DG + +V+V+ ATNR Q LD AL RFD I G+P+ ++R +I + + + G D++ +C +A +++R Q Sbjct: 387 PRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEAT-LRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQ 583 HSP 2 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE--MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ VL GPPG KT A+ +AN++G+ + + +M+KY GESER + ++F A + +IIF DE+D+ AV R S R+L+ LL ++DG EQ K V V+AATNR +D AL+ R D +I LPD R+EI Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVA-PSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREI 805
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +FS+A EL +IIF+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 363 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVAREL-QPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETR 501
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +FS+A EL +IIF+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 360 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVAREL-QPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVALPNEETR 498
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 PE+++++ ++ P+ VL GPPG GKT A+ +A++ + V ++ KY GE RL+ ++F LA E IIF+DE+D+ R E R R L LL ++DGF+ V VIAATNR LDPAL+ RFD +I LPD E R EI Sbjct: 163 PELFEEVGIDP--------PKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKE-KAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEI 319
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 PE+++++ ++ P+ VL GPPG GKT A+ +A++ + V ++ KY GE RL+ ++F LA E IIF+DE+D+ R E R R L LL ++DGF+ V VIAATNR LDPAL+ RFD +I LPD E R EI Sbjct: 163 PELFEEVGIDP--------PKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKE-KAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEI 319
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: TBP7_CAEEL (TAT-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 69/168 (41.07%), Postives = 91/168 (54.17%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEV-----VMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PEV++ KF N P+ V+F GPPGTGKT AR +AN+ V + +SK+ GESER L +F A + +IIF DE+D A R S+ + I+S LL +DG + +VVVI ATNR LDPAL RFD + F LPD R++I Sbjct: 414 PEVFE--------KFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAM-RPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQI 572
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: TBP7_CAEBR (TAT-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 67/159 (42.14%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 45 ETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEV-----VMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 E KF+ N P+ V+F GPPGTGKT AR +AN+ V + +SK+ GESER L +F A + +IIF DE+D A R S+ + I+S LL +DG + +VVVI ATNR LDPAL RFD + F LPD R+ I Sbjct: 429 EVFAKFKINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAM-RPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDSLDPALRRPGRFDRELRFSLPDLNARRHI 586 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |