CN188552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: AT1A_TAESO (Sodium/potassium-transporting ATPase subunit alpha OS=Taenia solium PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 36/124 (29.03%), Postives = 75/124 (60.48%), Query Frame = -2 Query: 498 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTIL 869 +V+K+++D++++DDNF S+VT + GR +++N++K + + LT N+ + + ++ +PL + +L ++L D + A++LA E+ D+M + P +P KL+ LI A Q+ ++ Sbjct: 731 DVSKQAADMILLDDNFASIVTGVEEGRIIFDNLKKSIAYTLTSNIPEITPFLIFILADVPLPLGTITILCIDLGTDMVPAISLAYEE-AEDIMKRMP---RDPFRDKLVNERLISMAYGQIGMI 850
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: AT1A_HYDAT (Sodium/potassium-transporting ATPase subunit alpha OS=Hydra attenuata PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 36/124 (29.03%), Postives = 75/124 (60.48%), Query Frame = -2 Query: 498 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTIL 869 +V+K+++D++++DDNF S+VT + GR +++N++K + + LT N+ + + + +PL + +L ++L D + A++LA E+ +D+M + P P+ KL+ LI A Q+ ++ Sbjct: 748 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIVYTLTSNIPEISPFLMFILFGIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRHP---RNPIRDKLVNERLISLAYGQIGMM 868
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: AT1A4_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-4 OS=Homo sapiens GN=ATP1A4 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 36/127 (28.35%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 489 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTL 869 +V+K+++D++++DDNF S+VT + GR +++N++K + + LT N+ + + + +PL + +L ++L D + A++LA E +D+M + P P L+ LI A Q+ ++ L Sbjct: 746 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIMYTLTSNIPEITPFLMFIILGIPLPLGTITILCIDLGTDMVPAISLAYESAESDIMKRLP---RNPKTDNLVNHRLIGMAYGQIGMIQAL 869
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ATC3_SCHPO (Calcium-transporting ATPase 3 OS=Schizosaccharomyces pombe GN=cta3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 34/102 (33.33%), Postives = 60/102 (58.82%), Query Frame = -2 Query: 579 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKV-----PLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP 869 +VAK++SDIV+ DDNF+S+V + GR +++NI +F+ L NV +++ V +V P++ V++LW N+I + ++ L E D+M + P Sbjct: 726 DVAKDASDIVLTDDNFSSIVNAIEEGRRMFDNIMRFVLHLLVSNVGEVILLVVGLAFRDEVHLSVFPMSPVEILWCNMITSSFPSMGLGMELAQPDVMERLP 827 The following BLAST results are available for this feature:
BLAST of CN188552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188552 ID=CN188552; Name=CN188552; organism=Citrus sinensis; type=EST; length=870bpback to top |