CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCTU (Malate dehydrogenase OS=Mycobacterium tuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +LQALEGV MEL+D FPLL V+IG +P ++F+ ALL+GA+PRG GMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCTA (Malate dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +LQALEGV MEL+D FPLL V+IG +P ++F+ ALL+GA+PRG GMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +LQALEGV MEL+D FPLL V+IG +P ++F+ ALL+GA+PRG GMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +LQALEGV MEL+D FPLL V+IG +P ++F+ ALL+GA+PRG GMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +LQALEGV MEL+D FPLL V+IG +P ++F+ ALL+GA+PRG GMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25 Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +L+ALEGV MEL+D FPLL V+IG + ++F+ A ALL+GA+PRGPGMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25 Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +L+ALEGV MEL+D FPLL V+IG + ++F+ A ALL+GA+PRGPGMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + IA+SG AG IA LLF+LA+GE+ GP+Q I L++L +L ALEGV ME+ED FPLL +KI +PY+ FED ++ALLIGAK RGPGMER LL N Sbjct: 5 IKIAISGGAGQIAYSLLFRLASGELFGPNQLIELQVLEVPNALSALEGVKMEIEDCAFPLLSSIKICSDPYQAFEDIDYALLIGAKSRGPGMERRDLLQEN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25 Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I+ LLF++AAGE+LG DQP+ L++L +L+AL+GVAMEL+D FPLL + +P F+DA++ALL+GA+PRGPGMER LL+ N Sbjct: 2 KAPVRVAVTGAAGQISYSLLFRIAAGEMLGKDQPVILQMLEITPALEALKGVAMELDDCAFPLLAGMVCSDDPNVAFKDADYALLVGARPRGPGMERKDLLEAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 59/106 (55.66%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL ++ +P F+DA++ALL+G++PRGPGMERA LL IN Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLSIN 108 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |