CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+GE+LG DQP+ L LL ++ AL+GV MELED FPLL + +P F+D + ALL+GA+PR GMER LL+ N Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILHLLDLPQAQTALKGVMMELEDCAFPLLAGMVATDDPNVAFKDVKVALLVGARPRSKGMERKDLLEAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURS3 (Malate dehydrogenase OS=Burkholderia sp. (strain 383) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURPP (Malate dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPEVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURCH (Malate dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURCC (Malate dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL V I +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANOR (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDIDVALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANOP (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDIDVALLVGARPRGPGMERKDLL 104 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |