CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANOM (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDIDVALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANCP (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDIDVALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANCB (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDIDVALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANC8 (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDIDVALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 V +AV+GAAG I LLF++A+GE+LG +QP+ L+LL ++ A++GV MELED FPLL + +P F+DA+ LL+GA+PR GMERA LL+ N Sbjct: 5 VRVAVTGAAGQIGYSLLFRIASGEMLGQNQPVILQLLDLPQAQNAVKGVMMELEDCAFPLLAGMVATDDPNVAFKDADICLLVGARPRSKGMERADLLEAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K +AV+GAAG I LLF++A G++LG DQP+ L+LL ++ A++GV MELED FPLL V + +P F+DA+ ALL+GA+PR GMER LL N Sbjct: 3 KPAKRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 49/104 (47.12%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +A++GA+G I LLF++A+G++LG DQPI L+ L ++ +L+GV+MEL+D FPLL+ + P E F A++ALL+GA+PR GMER LL N Sbjct: 22 KAPVRVAITGASGQIGYQLLFRIASGDMLGKDQPIILQCLELPGAMNSLKGVSMELDDCAFPLLKGIVQSDKPEEAFAGADYALLVGARPRSKGMERGDLLKAN 125
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K VN+ V+GAAG I LLF++A+G++LG D P+ L+LL ++++A EG AMEL+D FPLL V I +P + F+ ALL+GA+PR GMER LL+ N Sbjct: 3 KAPVNVTVTGAAGQIGYALLFRIASGQLLGVDTPVRLRLLEIPQAIKAAEGTAMELDDCAFPLLAGVDIYDDPRKAFDGVNVALLVGARPRTKGMERRDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_STRMK (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=mdh PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +++ AL+GV MELED FPLL + +G + E+ F+DA+ ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDADIALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_STRM5 (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=mdh PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +++ AL+GV MELED FPLL + +G + E+ F+DA+ ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDADIALLVGARPRGPGMERKDLL 104 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |