CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_STEMA (Malate dehydrogenase (Fragment) OS=Stenotrophomonas maltophilia GN=mdh PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLL 699 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L +++ AL+GV MELED FPLL + +G + E+ F+DA+ ALL+GA+PRGPGMER LL Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDADIALLVGARPRGPGMERKDLL 104
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 412 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + V+GAAG I+ LL+++A GEV G D P+ LKLL ++L EGVAMEL DS FPLLR + I + E F+ A A L+GAKPRG G ERA LL N Sbjct: 12 VTVTGAAGQISYSLLWRIANGEVFGTDTPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANN 110
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANC5 (Malate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+G++PRGPGMER LL N Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDVDIALLVGSRPRGPGMERKDLLLAN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL--LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL-FEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+L L E++ AL+GV MELED FPLL + +G + E+ F+D + ALL+G++PRGPGMER LL N Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGM-VGTDDAEVAFKDVDVALLVGSRPRGPGMERKDLLLAN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 VN+ V+GAAG I LLF++A+G++LG D P+ L+LL ++++A EG A+ELEDS FPLL V + + FE ALL+GA+PR GMER LL N Sbjct: 6 VNVTVTGAAGQIGYALLFRIASGQLLGADTPVKLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 VN+ V+GAAG I LLF++A+G++LG D P+ L+LL ++++A EG A+ELEDS FPLL V + + FE ALL+GA+PR GMER LL N Sbjct: 6 VNVTVTGAAGQIGYALLFRIASGQLLGADTPVRLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + IAV+GAAG I LLF++A+G + G D P+ L+LL +L+ALEGV MEL+D FP L V+IG + +F+ ALL+GA+PR GMER LL N Sbjct: 5 IKIAVTGAAGQIGYSLLFRIASGALFGGDTPVQLRLLEITPALKALEGVVMELDDCAFPALDSVEIGDDADHIFDGVTLALLVGARPRSKGMERGDLLSAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ACICJ (Malate dehydrogenase OS=Acidiphilium cryptum (strain JF-5) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V IAV+GAAG IA L+F++A+G +LGPDQP+ L LL + AL GV MELED FPLL + +P F+D + L+GA+PRG GMER LL N Sbjct: 3 KSPVRIAVTGAAGQIAYALVFRIASGALLGPDQPVILHLLDLPQMQGALGGVMMELEDCAFPLLAGMVATDDPKVAFKDIDIGFLVGARPRGKGMERKDLLGAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPBL (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mdh PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+G++ G D + +++L E ++ A +GV MELED FPLL++V + + F+D WALL+G+ PR GMER LL IN Sbjct: 3 KTVKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKIN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPBJ (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mdh PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+G++ G D + +++L E ++ A +GV MELED FPLL++V + + F+D WALL+G+ PR GMER LL IN Sbjct: 3 KTVKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKIN 105 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |