CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 46/101 (45.54%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 V + V+GAAG I LLF++A+G+++GPD P+ L+LL ++++A EG AMEL+D FPLL+ +++ + F+ ALL+GA+PR GMER LL+ N Sbjct: 6 VTVTVTGAAGQIGYALLFRIASGQLIGPDTPVRLRLLEIPQAVKAAEGTAMELDDCAFPLLQGIEVTDDARTAFDGTNVALLVGARPRTKGMERGDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 412 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + V+GAAG I LF++AAG +LGPD PI L+LL ++ A EG AMEL+DS FPLL +V++ +P F+ + ALLIG++PR GMER LL N Sbjct: 10 VTVTGAAGSIGYAALFRIAAGAMLGPDTPIRLRLLEIPPAVSAAEGTAMELDDSAFPLLLDVEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_COXBN (Malate dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=mdh PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF+LA+G+ G D + L LL E +L AL+GV ELED FPLL + + +P F D WALL+GA PR GMER LL+ N Sbjct: 3 KHVKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVTELEDCAFPLLCNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 412 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + V+GAAG I+ LL+++A GEV G + P+ LKLL ++L EGVAMEL DS FPLLR + I + E F+ A A L+GAKPRG G ERA LL N Sbjct: 12 VTVTGAAGQISYSLLWRIANGEVFGTETPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANN 110
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 VN+ V+GAAG I LLF++A+G++LG D P+ L+LL +L+A EG AMEL+D FPLL+ + I +P F+ LL+GA+PR GMER LL N Sbjct: 6 VNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIDITDDPNVAFDGTNVGLLVGARPRTKGMERGDLLSAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+G++ G D + +++L E ++ A +GV MELED FPLL++V + + F++ WALL+G+ PR GMER LL IN Sbjct: 3 KTVKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKIN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+G++ G D + +++L E ++ A +GV MELED FPLL++V + + F++ WALL+G+ PR GMER LL IN Sbjct: 3 KTVKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKIN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_COREF (Malate dehydrogenase OS=Corynebacterium efficiens GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 412 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 I V+GAAG IA LL+++A GEV G D P+ L LL +L EGVAMEL DS FPLL + I + E F+ A A L+GAKPRG G ERA LL N Sbjct: 7 ITVTGAAGQIAYSLLWRIANGEVYGADTPVELNLLEIPDALGGAEGVAMELSDSAFPLLHNINITADLNEAFDGANAAFLVGAKPRGKGEERAALLSNN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEGPL (Malate dehydrogenase OS=Legionella pneumophila (strain Lens) GN=mdh PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19 Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 V +AV+GAAG I L+F++A+G++ GP+ + L LL E +L +LEGVAMEL+D FPLL+ + + + + WALL+G+ PR GMER+ LL IN Sbjct: 6 VRVAVTGAAGQIGYALVFRIASGQMFGPNTEVELNLLELEPALPSLEGVAMELDDCAFPLLKRIVCTADLNKAMDGVNWALLVGSVPRKQGMERSDLLQIN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEGPH (Malate dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=mdh PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19 Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 V +AV+GAAG I L+F++A+G++ GP+ + L LL E +L +LEGVAMEL+D FPLL+ + + + + WALL+G+ PR GMER+ LL IN Sbjct: 6 VRVAVTGAAGQIGYALVFRIASGQMFGPNTEVELNLLELEPALPSLEGVAMELDDCAFPLLKRIVCTADLNKAMDGVNWALLVGSVPRKQGMERSDLLQIN 106 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |