CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_DELAS (Malate dehydrogenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ AL+GV MELED FPLL ++ +P + F+D ++ALL+GA+PRGPGMERA LL N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPLQAFKDTDYALLVGARPRGPGMERADLLAAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ AL+GV MELED FPLL ++ +P F+D ++ALL+GA+PRGPGMERA LL N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL+EV +P F+DA+ ALL+GA+PRGPGMER LL +N Sbjct: 3 KPAMRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLQEVTAHADPKTAFKDADVALLVGARPRGPGMERKDLLTVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ACISJ (Malate dehydrogenase OS=Acidovorax sp. (strain JS42) GN=mdh PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ AL+GV MELED FPLL ++ +P F+D ++ALL+GA+PRGPGMERA LL N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_METCA (Malate dehydrogenase OS=Methylococcus capsulatus GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V++AV+GAAG IA LLF++A G++ GP QP+ LKLL + + LEGVAMEL+D PLL+E+++ +P E+F+ AE ++GA PRGPGMER LL +N Sbjct: 2 KTPVHVAVTGAAGQIAYSLLFRIAVGDLFGPHQPVILKLLDVPSAERVLEGVAMELDDCASPLLQEIEVSSDPAEVFDGAEAVFMLGATPRGPGMERRDLLQVN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL EV +P F+DA+ ALL+GA+PRGPGMER LL +N Sbjct: 3 KPALRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL EV +P F+DA+ ALL+GA+PRGPGMER LL +N Sbjct: 3 KPALRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL EV +P F+DA+ ALL+GA+PRGPGMER LL +N Sbjct: 3 KPALRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ACIAC (Malate dehydrogenase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL ++ +P F+D ++ALL+GA+PRGPGMERA LL N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLAGMEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_VARPS (Malate dehydrogenase OS=Variovorax paradoxus (strain S110) GN=mdh PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24 Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MEL+D FPLL ++ +P F+DA++ALL+G++PRGPGMERA LL +N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELDDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVN 108 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |