CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24 Identity = 57/106 (53.77%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGS--ERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I +LF++A+GE+LG DQP+ L+LL E++ QAL+GV MEL+D FPLL ++ +P F+D ++ALLIG++PRGPGMERA LL +N Sbjct: 3 KKPVRVAVTGAAGQIGYAILFRIASGEMLGKDQPVILQLLEVPVEKAQQALQGVMMELQDCAFPLLAGMEAHSDPMTAFKDVDYALLIGSRPRGPGMERAELLAVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24 Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MEL+D FPLL+EV +P F+DA+ ALL+GA+PRGPGMER LL +N Sbjct: 3 KPAMRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELDDCAFPLLQEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_POLNA (Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGS--ERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E +AL+GV MEL+D FPLL E+ +P F+DA++ALL+G++PRGPGMERA LL +N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMELDDCAFPLLVEMTAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LG D+PI L+LL E +L+ALEGV MEL+D F LL V+IG +P ++F+ ALL+GA+PRGPGMER LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGLDRPIELRLLEIEPALKALEGVVMELDDCAFLLLAGVEIGADPNKVFDGVNLALLVGARPRGPGMERGDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGS--ERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ +AL+GV MELED FPLL ++ +P F+D ++ALL+GA+PRGPGMERA LL N Sbjct: 3 KSPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEKAQEALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++AAGE+LG DQP+ L+LL ++++ALEGV MELED FPLL ++ +P F+DA++ALL+GA PR GMER LL +N Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++AAGE+LG DQP+ L+LL ++++ALEGV MELED FPLL ++ +P F+DA++ALL+GA PR GMER LL +N Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++AAGE+LG DQP+ L+LL ++++ALEGV MELED FPLL ++ +P F+DA++ALL+GA PR GMER LL +N Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V + V+GAAG I+ LLF++AAG++LG DQP+ L+LL +L+AL+GVAMEL+D FPLL + +P F+D+++ALL+GA+PRGPGMER LL N Sbjct: 2 KAPVRVTVTGAAGQISYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVAMELDDCAFPLLAGIVTTDDPSVAFKDSDYALLVGARPRGPGMERKDLLAAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_VEREI (Malate dehydrogenase OS=Verminephrobacter eiseniae (strain EF01-2) GN=mdh PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.595e-23 Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 KK V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL +E +AL GV MEL+D FPLL + +P F+DA++ALL+G++PRGPGMERA LL +N Sbjct: 3 KKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPAEGPQKALNGVMMELDDCAFPLLAGMTAHSDPMAAFKDADYALLVGSRPRGPGMERAELLAVN 108 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |