CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 57/106 (53.77%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGS--ERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K+ V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ QAL+GV MEL+D FPLL + +P F+DA++ALL+G++PRGPGMERA LL +N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 57/106 (53.77%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGS--ERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K+ V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL E++ QAL+GV MEL+D FPLL + +P F+DA++ALL+G++PRGPGMERA LL +N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEIPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH1_BURVG (Malate dehydrogenase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 412 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 +AV+GAAG IA LLF++A G++LG DQP+ L+LL +L AL GV MELED FPLL+ V+I +P F DA++A+L+G++PRG GMER LL N Sbjct: 8 VAVTGAAGQIAYSLLFRIARGDLLGDDQPVILQLLELPHALDALRGVVMELEDCAFPLLQSVEISDDPRVAFRDADYAMLVGSRPRGKGMERRDLLAAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23 Identity = 54/104 (51.92%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V + V+GAAG I+ LLF++AAGE+LG DQP+ L++L +L+AL+GVAMEL+D FPLL + + F+D+++ALL+GA+PRGPGMER LL+ N Sbjct: 2 KAPVRVTVTGAAGQISYSLLFRIAAGEMLGADQPVILQMLEITPALEALKGVAMELDDCAFPLLHSMVCTDDANVAFKDSDYALLVGARPRGPGMERNDLLEAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K+ V +AV+GAAG I+ +LF++A+GE+LG DQP+ L+LL +L AL+GV MELED FPLL V + F+DA++ALL+GA+PRGPGMER LL+ N Sbjct: 2 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEITPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDADYALLVGARPRGPGMERKDLLEAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_NITMU (Malate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mdh PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23 Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG IA LLF++AAG++LG DQP+ L+LL +SL +L+GV MEL+D FPLLR++ I +P F D A+L+GA+PR GMER LL+ N Sbjct: 2 KTPIRVAVTGAAGQIAYSLLFRIAAGDMLGEDQPVILQLLDIPQSLPSLKGVVMELDDCAFPLLRDITITDDPKTAFRDINIAMLVGARPRTKGMERKDLLEAN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++AAGE+LG DQP+ L+LL E++ +AL+GV ME+ED FPLL ++ +P F+D + ALL+GA+PRGPGMERA LL N Sbjct: 3 KAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMQAHSDPMTAFKDVDVALLVGARPRGPGMERADLLSAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 391 SWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 S K+ V +AV+GAAG I+ +LF++A+GE+LG DQP+ L+LL +L AL+GV MELED FPLL V + F+D ++ALL+G++PRGPGMER LL+ N Sbjct: 2 SMKQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEAN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_KOCRD (Malate dehydrogenase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 V +AV+GAAG I LLF++A G++LG +P+ L+LL +L ALEG MEL+D FPLL +V+IG +P E+F+ A+ ALL+GA+PR GMER LL+ N Sbjct: 6 VTVAVTGAAGQIGYSLLFRIAHGDMLGRQRPVRLRLLEIPSALPALEGTVMELQDCAFPLLADVEIGSDPREVFDGAQLALLVGARPRTKGMERGDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I+ LLF++A+G++LG DQP+ L+LL +L+AL GV MELED FPL+ + + F+DA++ALL+GA+PRGPGMER LL+ N Sbjct: 4 KAPVRVAVTGAAGQISYSLLFRIASGDMLGKDQPVILQLLEITPALEALNGVIMELEDCAFPLVAGITGTDDANVAFKDADYALLVGARPRGPGMERKDLLEAN 107 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |