CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.197e-22 Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLG--SERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++AAGE+LG DQP+ L+LL E++ +AL+GV ME+ED FPLL ++ +P F+D + ALL+GA+PRGPGMER LL N Sbjct: 3 KAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMEAHADPMTAFKDVDVALLVGARPRGPGMERKDLLSAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.197e-22 Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 391 SWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 S K+ V +AV+GAAG I+ +LF++A+GE+LG DQP+ L+LL +L AL+GV MELED FPLL + + F+D ++ALL+G++PRGPGMER LL+ N Sbjct: 2 SMKQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGIVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEAN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.197e-22 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K+ V +AV+GAAG I LLF++AAG++LG DQP+ L+LL +L+AL GV MEL D FPLL +V +P F+DA++ALL+GA PR GMER LL N Sbjct: 4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGQDQPVILQLLEITPALKALNGVVMELRDGAFPLLADVITSDDPMVAFKDADYALLVGAMPRKAGMERGDLLGAN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.197e-22 Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K+ V +AV+GAAG I LLF++AAG++LG DQP+ L+LL +L+AL+GV MEL D +PLL +V +P F+DA++ALL+GA PR GMER LL N Sbjct: 4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVVMELRDGAYPLLADVVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGAN 107
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K+ V +AV+GAAG I LLF++AAG++LG DQP+ L+LL +L+AL GV MEL D FPLL ++ +P F+DA++ALL+GA PR GMER LL N Sbjct: 8 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALAGVVMELRDCAFPLLADIVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGAN 111
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPBP (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+G++ GPD + L+LL E+++ A +GV MEL+D FPLL +V + N E F D WALL+G+ PR GMER LL IN Sbjct: 3 KKVKVAVTGAAGQIGYALLFRIASGQMFGPDTAVELQLLELEQAIPAAKGVIMELDDCAFPLLEKVSVSSNIDEAFRDINWALLVGSVPRKAGMERGDLLKIN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_LEPBA (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 400 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+G++ GPD + L+LL E+++ A +GV MEL+D FPLL +V + N E F D WALL+G+ PR GMER LL IN Sbjct: 3 KKVKVAVTGAAGQIGYALLFRIASGQMFGPDTAVELQLLELEQAIPAAKGVIMELDDCAFPLLEKVSVSSNIDEAFRDINWALLVGSVPRKAGMERGDLLKIN 105
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLL--GSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K + +AV+GAAG I LLF++A G++LG DQP+ L+LL E++ +AL+GV ME++D FPLL V +P F+DA+ ALL+GA+PRGPGMER LL+ N Sbjct: 3 KAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIADEKAQKALKGVIMEIDDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEAN 108
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 397 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 K V +AV+GAAG I LLF++A+GE+LG DQP+ L+LL ++ +A++GV MELED FPLL + +P F+DA+ ALL+GA+PRGPGMER LL N Sbjct: 3 KAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLDLPQAQKAVKGVMMELEDCAFPLLAGMIATDDPNVAFKDAKVALLVGARPRGPGMERKDLLTEN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22 Identity = 51/99 (51.52%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 412 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 IAVSGAAG IA LLF++A G++LG DQP+ L+LL ++ A++GV MEL+D FPLL+E+++ +P+ F +A++A L+G+KPR GMER LL N Sbjct: 8 IAVSGAAGQIAYSLLFRIAQGDLLGEDQPVILQLLDLPQAYGAVQGVVMELQDCAFPLLKEIQVATDPHAAFLNADYAFLVGSKPRTKGMERRDLLAEN 106 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |