CN188548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27 Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = -1 Query: 165 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 584 M+KRG + G +R + G+ + + V ADN+GA+ + +I V G + R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ IV Sbjct: 1 MAKRGGKRTVGVSYRFHVTPGIFLNSLVPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIIV 144
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_PYRAR (50S ribosomal protein L14P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.598e-27 Identity = 64/144 (44.44%), Postives = 95/144 (65.97%), Query Frame = -1 Query: 165 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 584 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G + R+P A VGDMV+ VK+GKP+LR+++ ++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ +V Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVKEGKPELRRQIFRGIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = -1 Query: 165 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 554 G + + L A V C DNTGAK + IISVK +G NR+P A +GDM + +VKKG P++RK+V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G KG+ I GPI +E A+ +P+I + A+ IV Sbjct: 3 GIRSNIPRALNAGAKVPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 60/130 (46.15%), Postives = 89/130 (68.46%), Query Frame = -1 Query: 165 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 554 G + + L A + C DNTGAK + IISVK +G NR+P A +GDM + +VKKG P++RK+V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 3 GMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = -1 Query: 165 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 554 G + + L A + C DNTGAK + IISVK +G NR+P A +GDM + +VKKG P++RK+++ AV+VRQ++ +RR DG+ + FEDNA VI + G KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = -1 Query: 165 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 530 GL + + CADNTGA+ L +ISV G G NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VIV+ + +G+ + GPI +E A + +ASAA IV Sbjct: 11 GLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 60/128 (46.88%), Postives = 84/128 (65.62%), Query Frame = -1 Query: 165 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 548 K ++ GL + + CADNTGA+ L +ISV G G NR P A +GD V +V KG P++R++V+ AV+VRQRKP RR +G + FEDNA VI++ E +G+ I GP+ +E A+ + IAS A IV Sbjct: 5 KADVTQGLSKGSLITCADNTGARELKVISVAGYSGTKNRHPKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPVAREVAERFGSIASTATMIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 165 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 548 K ++ GL + V CADNTGA+ L +ISV G G NR P A +GD V +V KG P++R++V+ AVIVRQRK RR DG + FEDNA VI++ E +G+ I GPI +E A+ + IAS A IV Sbjct: 5 KADVTKGLERGSLVTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPIAREVAERFGSIASTATMIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = -1 Query: 165 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 530 GL + + CADNTGA+ L + S+ G G NR P A +GD + +V KG P++R++V+ AV++RQRKP RR DG + FEDNA VIV+ + +G+ + GPI +E A+ + IAS A IV Sbjct: 11 GLEKGSLITCADNTGARELKVTSISGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAERFGSIASTATIIV 132
BLAST of CN188548 vs. ExPASy Swiss-Prot
Match: RL14_METB6 (50S ribosomal protein L14P OS=Methanoregula boonei (strain 6A8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25 Identity = 61/142 (42.96%), Postives = 87/142 (61.27%), Query Frame = -1 Query: 165 AKMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 590 AK SK R + G K + CADNTGA+ + I+SV G G R P +GD+ TVKKG PD+RKK++ AV++RQ+K RR +G+ + F+DNA V+V+ K E KG+ I GP+ +E A+ +P++ S A IV Sbjct: 3 AKQSKTPRALATGTK------------LTCADNTGARIVQIVSVFGYHGVRRRQPKMGLGDIATVTVKKGTPDMRKKLVRAVVIRQKKEMRRPNGLRVSFDDNAVVVVDEKNEPKGTEIKGPVAREVAERYPKLGSMATIIV 132 The following BLAST results are available for this feature:
BLAST of CN188548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188548 ID=CN188548; Name=CN188548; organism=Citrus sinensis; type=EST; length=710bpback to top |