CN188541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_PONAB (60S ribosomal protein L31 OS=Pongo abelii GN=RPL31 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.473e-23 Identity = 56/116 (48.28%), Postives = 73/116 (62.93%), Query Frame = -1 Query: 202 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVID 549 +K G+ EVVTREYTIN+HKR+HG FKK+AP+A+KEIRKFA K MGT DVR+D +LNK VW+ RN++ED+ + Y+LVT +P K L T +D Sbjct: 10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVD 123
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_DROME (60S ribosomal protein L31 OS=Drosophila melanogaster GN=RpL31 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.090e-22 Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = -1 Query: 193 TMVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 558 T EK K EVVTRE TI+L KR+H FKK+AP+AIKEIRKFA++ MGTTDVR+D +LNK +WS RND+ED+ + Y+ VT +P K L T+ ++ D Sbjct: 4 TKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTY--VPVSTFKNLQTENVESSD 123
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_DICDI (60S ribosomal protein L31 OS=Dictyostelium discoideum GN=rpl31 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20 Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = -1 Query: 205 EVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVI 522 E VTREYTINLHKRL+G TFK +APKA+K+++ FAQK MGT DVR+D KLNK +WS RN++E+A E+ Y++ ++ + + KGL TK + Sbjct: 5 EAVTREYTINLHKRLYGTTFKDRAPKAVKQVKLFAQKIMGTKDVRIDNKLNKFLWSQGIKNVPHRVRVTLSRKRNEDENATEKLYTVASLVIV--KSFKGLQTKKV 108
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_ASHGO (60S ribosomal protein L31 OS=Ashbya gossypii GN=RPL31 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 193 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 525 ++VVTREYTINLHKRLHG TFKK+AP+A+KEI+KFA+ MGT DVR+D +LN ++W RN+E+ A +S V + KGL T V++EE+ Sbjct: 5 KDVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRGVKGVPFRMRLRISRRRNEEDTAPPPLFSYVEPVVV--ASAKGLHTVVVEEEE 113
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_AEDAE (60S ribosomal protein L31 OS=Aedes aegypti GN=RpL31 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20 Identity = 53/124 (42.74%), Postives = 73/124 (58.87%), Query Frame = -1 Query: 193 ATTMVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 564 A T EK K EVVTRE TINL++RLH +KK+AP+A+K +RKFA+K MGT DVR+D +LNK +W RND+ED+ + Y+LVT +P K L T+ ++ + Sbjct: 2 AKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTY--VPVSTFKELQTENVESTE 123
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_DROVI (60S ribosomal protein L31 OS=Drosophila virilis GN=RpL31 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 56/128 (43.75%), Postives = 73/128 (57.03%), Query Frame = -1 Query: 193 ATTMVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVW----SXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 564 A T EK K EVVTRE TI+L KR+H FKK+AP+AIKEIRKF ++ MGT DVR+D +LNK +W S RND+ED+ + Y+LVT +P K L T+ ++ D Sbjct: 2 AKTKGEKRNKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIWSKGISLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVTYVPVPT--FKNLQTENVESSD 127
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_CANGA (60S ribosomal protein L31 OS=Candida glabrata GN=RPL31 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = -1 Query: 196 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 525 ++VVTREYTIN+HKRLHG +FKK+APKA+KEI+KFA+ MGT DVR+ +LN+++W RN+EE+AK +S V + KGL T V++E+ Sbjct: 5 KDVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGVKGVAFRLRLRISRKRNEEENAKNPLFSYVEPVFV--ASAKGLQTTVVEED 112
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31B_YEAST (60S ribosomal protein L31-B OS=Saccharomyces cerevisiae GN=RPL31B PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 196 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 525 ++VVTREYTINLHKRLHG +FKK+AP+A+KEI+KFA+ MGT DVR+ +LN+ +W RN+EEDAK +S V + KGL T V++E+ Sbjct: 5 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 112
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31A_YEAST (60S ribosomal protein L31-A OS=Saccharomyces cerevisiae GN=RPL31A PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 196 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 525 ++VVTREYTINLHKRLHG +FKK+AP+A+KEI+KFA+ MGT DVR+ +LN+ +W RN+EEDAK +S V + KGL T V++E+ Sbjct: 5 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 112
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_CAEEL (60S ribosomal protein L31 OS=Caenorhabditis elegans GN=rpl-31 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.335e-18 Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = -1 Query: 193 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 549 EK + EVVTREYTI++H R+ G KK+AP+AI EI+KFA+ M T DVRVD KLNK +WS RN++ED+ ++ Y+L T +P GL +D E+ Sbjct: 6 EKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTY--VPCTNFHGLTNVNVDSEE 122 The following BLAST results are available for this feature:
BLAST of CN188541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188541 ID=CN188541; Name=CN188541; organism=Citrus sinensis; type=EST; length=600bpback to top |