CK940077

Overview
NameCK940077
Unique NameCK940077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_DICDI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Dictyostelium discoideum GN=adi1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.582e-29
Identity = 62/140 (44.29%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  118 NPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNR 537
            N    +SLD L E  VLY+ ++ +     E L+ + + RGY   D + L  E     E+KLK F+ EH+H DEEIR+ L+G G+FD+RD++D+W++I  K GDLI++PA +YHRF LD S  +  MRLF   P W   NR
Sbjct:    8 NESDVISLDYLKEHNVLYFPMDREKENYKEPLETLCKERGYKNRDEVKLSKE-TPGLEDKLKIFFEEHLHDDEEIRFILDGCGFFDIRDKNDKWVKIKEKKGDLIIVPANMYHRFALDESRNIHAMRLFTDAPKWVPINR 146          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_SCHPO (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Schizosaccharomyces pombe GN=adi1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1
Query:  286 YEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNR---PQEDHPARKEYIKGL 582
            Y+  +K F+ EH+H DEEIR  L+G+GYFDVR   D+W+RI+++ GDLI+LP GIYHRFT  T +Y+  MRLF   P W A +R     E+  ARK Y+  +
Sbjct:   71 YDNMVKKFFEEHLHEDEEIRLILDGNGYFDVRSVDDRWVRIFVEKGDLIILPPGIYHRFTTTTDDYIHAMRLFHENPKWIALSRTDSTSEELDARKSYLNSI 172          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_SULSY (Acireductone dioxygenase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=mtnD PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.424e-15
Identity = 57/160 (35.62%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  118 NPKQFVSLDQLAELGVLY--WRLNP------KNYENDEE------------LQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA-YN 534
            NP++  S   L++ GV+Y  W ++       KNY+ DEE            L++++E  GY   D++ L  EK  N +  +  F  EH H D+E+R+ ++GSG F V+ E D  + I ++AG+LIV+PAG  H F LD +  +K +R+F     W A YN
Sbjct:   15 NPEEIKSF--LSQYGVVYDVWGVDRLPEDVRKNYDIDEENSKAIIQAYEKELKELKEKMGYITEDIVVLS-EKTPNLDGLMAKFKREHHHIDDEVRFVVDGSGIFPVKIE-DDIVDIHVEAGELIVVPAGARHWFELDENRKIKCIRVFKTPAGWEAIYN 170          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_BACA2 (Acireductone dioxygenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=mtnD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.971e-14
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 1
Query:   97 QRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 522
            ++LP  L+ K  ++ D+   +  ++          D E+Q I   RGY   D++ L  +   N +E LKNF  EH H D+E+R+ + G G F ++ +   +  + +  GDLI +P  I H FTL     V  +R+FV    W
Sbjct:   37 EKLPSELSEKYDLTEDEKERILAVF----------DTEIQDISARRGYQSQDVISLS-DTTPNLDELLKNFQREHHHTDDEVRFIVSGHGIFVIQGKDGTFFDVRLNPGDLISVPENIRHYFTLQEDRRVVAIRIFVTTEGW 167          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_DELAS (Acireductone dioxygenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=mtnD PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.018e-13
Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:  229 ARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 528
            A GY  MDL+ L P      +E L+ F   H HAD+E+RY LEG G F   D   Q   + ++ GD + +PAG+ HRFTL  +  +K +RLF     W A
Sbjct:   64 AHGYHSMDLVVLHPG-TPGLDEALERFDKPHTHADDEVRYILEGEGLFGFFDAGGQERVLRVQPGDYLRIPAGVEHRFTLTATRRIKALRLFADTAGWVA 162          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_BACWK (Acireductone dioxygenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=mtnD PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 42/141 (29.79%), Postives = 68/141 (48.23%), Query Frame = 1
Query:  100 RLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 522
            +LP HL     ++ +  AE+  L+           +E+  + E RGY   D++ L      N +E L NF  EH H D+E+R+ + G G F +  +  ++  + ++ GDLI +P    H FTL     V  +R+FV    W
Sbjct:   37 KLPTHLKENYSLTDENKAEILTLF----------SKEIADVSERRGYKAYDVVSLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGRFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGW 166          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_BACP2 (Acireductone dioxygenase OS=Bacillus pumilus (strain SAFR-032) GN=mtnD PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 41/141 (29.08%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  100 RLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 522
            +LP+ L+ K  ++ ++  E+  ++           +E++ I E RGY   D++ L  +   N ++ L+NF  EH H D+E+R+ + G G F ++ +   +  + +  GDLI +P  I H FTL     V  +R+FV    W
Sbjct:   38 KLPNRLSEKYDLTDEEKDEILTVF----------QKEIESISEKRGYKSQDVISLS-DATPNLDDLLQNFQREHHHTDDEVRFIVSGHGIFAIQGKDGVFFDVRLNPGDLISVPPHIRHYFTLQEDRKVVSVRIFVTTEGW 167          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_EXIS2 (Acireductone dioxygenase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=mtnD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.471e-12
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  208 ELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 522
            E+  + E RGY   D++ L  +   N +E L NF  EH H D+E+R+ + G G F ++D+   +  I +  GDLI +P    H FTL     V  +R+FV    W
Sbjct:   63 EITDVSERRGYQTADIISLS-DATPNLDELLVNFQKEHHHTDDEVRFIVSGHGVFAIQDDEVGYYNIELNPGDLISVPVNTRHYFTLQEDRKVVAVRIFVTTDGW 166          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_BACCR (Acireductone dioxygenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=mtnD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.921e-12
Identity = 41/141 (29.08%), Postives = 68/141 (48.23%), Query Frame = 1
Query:  100 RLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 522
            +LP HLN    ++ +  AE+  ++           +E+  +   RGY   D++ L      N +E L NF  EH H D+E+R+ + G G F +  +  ++  + ++ GDLI +P    H FTL     V  +R+FV    W
Sbjct:   37 KLPTHLNENYSLTDENKAEILAIF----------SKEIADVSARRGYKAHDVISLS-SSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGKFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGW 166          
BLAST of CK940077 vs. ExPASy Swiss-Prot
Match: MTND_BACCZ (Acireductone dioxygenase OS=Bacillus cereus (strain ZK / E33L) GN=mtnD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.279e-12
Identity = 41/141 (29.08%), Postives = 67/141 (47.52%), Query Frame = 1
Query:  100 RLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 522
            +LP HLN    ++ +  AE+  ++           +E+  +   RGY   D++ L      N +E L NF  EH H D+E+R+ + G G F +  +   +  + ++ GDLI +P    H FTL     V  +R+FV    W
Sbjct:   37 KLPPHLNENYSLTDENKAEILAVF----------SKEIADVSARRGYKAHDVISLS-NSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGW 166          
The following BLAST results are available for this feature:
BLAST of CK940077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
MTND_DICDI8.582e-2944.291,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_SCHPO9.819e-2550.001,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_SULSY2.424e-1535.63Acireductone dioxygenase OS=Sulfurihydrogenibium s... [more]
MTND_BACA25.971e-1430.99Acireductone dioxygenase OS=Bacillus amyloliquefac... [more]
MTND_DELAS1.018e-1341.00Acireductone dioxygenase OS=Delftia acidovorans (s... [more]
MTND_BACWK1.126e-1229.79Acireductone dioxygenase OS=Bacillus weihenstephan... [more]
MTND_BACP21.126e-1229.08Acireductone dioxygenase OS=Bacillus pumilus (stra... [more]
MTND_EXIS21.471e-1235.24Acireductone dioxygenase OS=Exiguobacterium sibiri... [more]
MTND_BACCR1.921e-1229.08Acireductone dioxygenase OS=Bacillus cereus (strai... [more]
MTND_BACCZ4.279e-1229.08Acireductone dioxygenase OS=Bacillus cereus (strai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004741_H02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK940077 ID=CK940077; Name=CK940077; organism=Citrus sinensis; type=EST; length=800bp
GGGGACCCGCGGTAGTTTCCGAGTTCAGGCTGGAAGAGTGAGTTCTAGTT
ACCGATGGTTCTCGAGGCGTGGTTTATGGATGAAAGTAGTCAAGACCAAC
GGCTCCCTCACCACCTCAACCCGAAGCAATTCGTATCGTTGGACCAATTG
GCAGAATTGGGAGTGCTGTATTGGCGCTTGAACCCGAAAAACTATGAGAA
CGATGAGGAATTGCAGAAGATCAGAGAAGCAAGAGGCTACAGTTACATGG
ATTTGCTTGATTTATGTCCGGAGAAAGTGACTAACTATGAGGAGAAGCTG
AAGAACTTTTACACGGAGCACATCCATGCCGACGAAGAGATACGCTACTG
TTTGGAAGGAAGTGGATATTTTGATGTTAGAGACGAGAGTGATCAGTGGA
TTCGAATCTGGATCAAAGCGGGTGATCTAATCGTTCTGCCAGCTGGAATC
TACCATCGTTTCACTCTTGACACTAGTAACTATGTTAAGTTGATGAGGTT
GTTTGTGGGAGAACCAGTGTGGACGGCATATAATCGGCCACAGGAGGATC
ATCCTGCCAGAAAGGAGTACATCAAAGGTTTGACTGGGCAGGCAGGGGTG
CCAGTTGAAGCTCATTAGAGTTTGAGAGTACTTTACCATTTACACTTGTG
TATGTGTATGTTAATGTAACTATATTTATATAGACTTCTGATAAACCACA
TTTAGCTAAACCTTATGTCTATGCATTTGGTGCTTTGATGAGATTTAATA
TACAGCAGCTTAATGCTGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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