CN188527

Overview
NameCN188527
Unique NameCN188527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.732e-35
Identity = 79/144 (54.86%), Postives = 98/144 (68.06%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYG-RTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+FD++IG   G+  GRI   L+ D VP+TAENFR  CTGE      +  GYKGS FHR+I +FM Q              I+G ++F+DENF L H  PG++SMANAGPNTNGSQFFI TV TP+LD +HVVFG+V EGMD+V
Sbjct:   14 VFFDITIG---GEPLGRITFELFKDVVPKTAENFRQFCTGESKTPVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVV 154          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35
Identity = 79/144 (54.86%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+FDV++G   G+  GR+ + L+ D  P+TAENFR  CTGE      +  GYKGS FHRVIKDFMIQ             +IYG   F DENF L H  PG++SMAN+GPNTNG QFFI T  TP+L+ +HVVFGQV++GMDIV
Sbjct:   18 VFFDVALG---GEPLGRLKLELFADVTPRTAENFRQFCTGESKNQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIV 158          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35
Identity = 78/144 (54.17%), Postives = 98/144 (68.06%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYG-RTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+FD+++G   G+  GRI   L+ D VP+TAENFR  CTGE      +  GYKGS FHR+I +FM Q              IYG ++F DENF L H  PG++SMANAGPNTNGSQFFI TV TP+LD +HVVFG+V++GMD+V
Sbjct:   14 VFFDITLG---GEPLGRITFELFKDVVPRTAENFRQFCTGESKNNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVV 154          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35
Identity = 81/147 (55.10%), Postives = 93/147 (63.27%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG---------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            K YFD+SIG   G   GRIV  LY D VP+TAENF  LC G+ G           YKGS FHRVIKDFMIQ             SIYG  F+DENF++ H  P ++SMANAGPNTNGSQ FI  V TP LD +HVVFG+V+EG  +V
Sbjct:    5 KAYFDISIG---GTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLV 148          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.583e-35
Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 3
Query:  297 KVYFDVSIGNP-VGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +V+FD+ IGN   G++A  +V+      VP+TAENFRALCTGEKG G       +KGS FHRVIK FMIQ             SIYG  F DENF+L H  P ++SMAN+GP TNGSQFFI TV TP LD +HVVFG+V+ G  +V
Sbjct:    9 RVFFDIQIGNEKTGRIALELVL------VPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVV 148          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34
Identity = 81/152 (53.29%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  282 SKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG---------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            S+   K +FD+SIG   GK AGRIV  LY D VP+TAENF  LC G  GF          YKGS FHRVIK FM Q             SIYG  F+DENF L H  P ++SMANAG NTNGSQ FI  V TP LD +HVVFG+V++G  +V
Sbjct:    2 SETRPKTFFDISIG---GKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLV 150          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34
Identity = 77/147 (52.38%), Postives = 93/147 (63.27%), Query Frame = 3
Query:  270 ADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            A+L  +    V+FDV      G+  GRI + L+ + VP+TAENFRALCTGEKGFG+K S FHRVI DF+ Q             SIYG  F+DENF + H GPG++SMAN G NTN SQF I   K   LD +HVVFG V +GMD V
Sbjct: 3056 AELSKETNPVVFFDVCAD---GEPLGRITMELFSNIVPRTAENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTV 3199          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 77/144 (53.47%), Postives = 96/144 (66.67%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+FD+++G   G+  GRI + L+    P+TAENFR  CTGE      +  GYK S FHRVIKDFMIQ             +IYG   F+DENF L H  PG++SMAN+GPNTNG QFFI T  TP+L+ +HVVFGQV+EGMD+V
Sbjct:   16 VFFDITLG---GESLGRIKMELFTSITPRTAENFRQFCTGESKSPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVV 156          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.278e-34
Identity = 77/139 (55.40%), Postives = 91/139 (65.47%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGF-----GYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGM 701
            V+ +V+ G   G   G IVI L+ D  P+TAENFR  CTGE        GYK  TFHRVIKDFMIQ             SIYG  F+DENF+L HIGPG++SMANAG +TNG QFFI   KT +LD +HVVFG+VL+GM
Sbjct:   19 VFLEVTAG---GAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGM 154          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33
Identity = 79/144 (54.86%), Postives = 94/144 (65.28%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+FD+++G   G   GRI + L+ D  P+TAENFR  CTGE      K  GYK S FHRVIKDFMIQ             +IYG   F DENF L H   GV+SMAN+GPNTNG QFFI T  TP+L+ +HVVFGQV++GMDIV
Sbjct:   16 VFFDIALG---GVPLGRIKMELFADVTPRTAENFRRFCTGESKNSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIV 156          
The following BLAST results are available for this feature:
BLAST of CN188527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
PPIH_GIBZE1.732e-3554.86Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIH_EMENI3.859e-3554.86Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIH_NEUCR5.040e-3554.17Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPID_CANGA5.040e-3555.10Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPID_ASPOR6.583e-3554.11Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPID_KLULA2.502e-3453.29Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
RBP2_HUMAN3.267e-3452.38E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPIH_ASPOR5.573e-3453.47Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
CYP11_CAEEL7.278e-3455.40Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPIH_ASPFU1.241e-3354.86Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188527 ID=CN188527; Name=CN188527; organism=Citrus sinensis; type=EST; length=710bp
GCGGTTCCATTCCATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATA
AATGTAGGCTGGGTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCC
CTCGCGTAATGCAATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAA
ATGCTTCATCATCCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTT
CCCCCTCTCACTCATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGT
TCGGGCCAGTGCTGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAG
TTTATTTCGATGTGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGA
ATCGTGATTGGATTGTACGGTGATGATGTGCCCCAAACGGCAGAGAACTT
CCGTGCTTTATGCACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACAT
TCCATCGTGTTATCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAA
GGCAATGGAACTGGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGA
GAACTTCAAATTGTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATG
CAGGTCCCAACACTAATGGCAGCCAATTTTTCATTTGTACGGTCAAGACA
CCATGGCTAGATCAGAGGCATGTTGTCTTTGGGCAAGTTTTGGAGGGCAT
GGACATTGTT
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