CN188527

Overview
NameCN188527
Unique NameCN188527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28
Identity = 69/144 (47.92%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  303 YFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +FD+ I     +  GRI+  L+ D  P+T +NF  LC+GEKG G        YKGSTFHRV+K+FMIQ             SIYG  FKDENF L H    ++SMAN G +TNGSQFFI T   P LD  HVVFG V+ G +++
Sbjct:   10 HFDIEINR---EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVI 150          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28
Identity = 71/146 (48.63%), Postives = 87/146 (59.59%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAG--RIVIGLYGDDVPQTAENFRALCTGE-------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            VY D++ G+      G  RIV+ LY D VP+TAENFR LCT         +   ++ S FHRVI  FMIQ             SIYG  F+DE+    H  P ++SMANAG NTNGSQFFI TV TP LD +HVVFG+VL+G  +V
Sbjct:   15 VYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVV 160          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28
Identity = 65/125 (52.00%), Postives = 79/125 (63.20%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGM 701
            AGR+   L+ D VP+T+ENFR LCTGE        GYK S FHR+IKDFM Q             SIYG  F DENF L H   G++SMAN+GP TNG QFFI     P+LD +HVVFG+V++G+
Sbjct:    3 AGRLKCELFSDIVPRTSENFRQLCTGEFRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGL 127          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27
Identity = 71/141 (50.35%), Postives = 90/141 (63.83%), Query Frame = 3
Query:  300 VYFDVSIGN-PVGKLAGRIVIGLYGDDVPQTAENFRALCTGE---KGF--GYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGM 701
            V+FD+SIG+ PVG    R+ + L+ D VP+TAENFR LCTGE    G   GYK   FHRVIKDFM+Q              IYG   F DENF   H G G++SMAN+GPN+NG QFFI      +LD +HVVFG++++G+
Sbjct:   13 VFFDISIGDVPVG----RMKMELFSDIVPRTAENFRQLCTGEYKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGL 149          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27
Identity = 67/153 (43.79%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  261 AEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCT-GEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLS--HIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            A  + L   VT+++Y DV       K  GRI  GL+G   P+T  NFR +C  G  G  Y GS FHRV+  F++Q             SIYG  F DE+  L+  H  PG + MAN GP+TNG QF++ TV   WLD +H VFG+VLEGMD +
Sbjct:   16 AVASGLSFTVTSRIYMDVKHNK---KPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTI 165          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 61/147 (41.50%), Postives = 88/147 (59.86%), Query Frame = 3
Query:  294 NKVYFDVSIG-NPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            N V+ D+SI   P+G    R++  LY D  P+T +NF+ LCTG+ GF        Y GS FHRV+++  +Q             SIYG TF+DENF + H   GV+ M N G ++NGSQF+I     P+LD+++V FGQ++EG D++
Sbjct:  138 NFVFLDISIDLYPIG----RLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVL 280          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25
Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 3
Query:  300 VYFDVSI-GNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+ D+ I  +P+G    R++  LY D  P+T +NF+ LCTG+ GF        YK S FHR++++  IQ             SIYG TF+DENF + H   GV+ MAN G ++NGSQF+I    TP+LD++ V FGQ++EG +++
Sbjct:  144 VFLDICIDSSPIG----RLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVL 284          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 63/123 (51.22%), Postives = 78/123 (63.41%), Query Frame = 3
Query:  345 GRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            G I I LY D  P+T +NF  L   ++G+ Y G +FHR+I DFMIQ             SIYG  F DE N  L H G G++SMANAGPNTNGSQFFI    TPWLD +H +FG+V +GM++V
Sbjct:   14 GSIHIELYWDHAPRTCKNFYELA--KRGY-YDGVSFHRIIADFMIQGGDPTGTGRGGT-SIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVV 132          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 59/123 (47.97%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  345 GRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            G   + LY +  P+T +NF  L   ++G+ Y  + FHR+IKDFMIQ             SIYG  F+DE    L H G GV+SMANAGPNTNGSQFFI    TPWLD +H +FG+V +GM ++
Sbjct:   12 GTFTLELYTNHAPKTCKNFATLA--DRGY-YDSTVFHRIIKDFMIQGGDPTGTGRGGS-SIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVI 130          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23
Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  345 GRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDI 707
            G+I+I LY +  P+T +NF  L   ++G+ Y G  FHRVI DF+IQ             SIYG  F DE +  L H G G++SMANAGPNTN SQFFI    TPWLD +H +FG+V+ G+ +
Sbjct:   11 GKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSV 128          
The following BLAST results are available for this feature:
BLAST of CN188527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
NKTR_HUMAN1.202e-2847.92NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPID_USTMA1.570e-2848.63Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIH_USTMA3.499e-2852.00Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPIH_RHIOR1.329e-2750.35Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYPR_DROME5.052e-2743.79Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
PPIL6_BOVIN5.586e-2641.50Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN3.621e-2541.38Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIL1_RHIOR6.176e-2551.22Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIL1_NEUCR6.828e-2447.97Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_SCHPO9.860e-2347.54Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188527 ID=CN188527; Name=CN188527; organism=Citrus sinensis; type=EST; length=710bp
GCGGTTCCATTCCATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATA
AATGTAGGCTGGGTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCC
CTCGCGTAATGCAATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAA
ATGCTTCATCATCCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTT
CCCCCTCTCACTCATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGT
TCGGGCCAGTGCTGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAG
TTTATTTCGATGTGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGA
ATCGTGATTGGATTGTACGGTGATGATGTGCCCCAAACGGCAGAGAACTT
CCGTGCTTTATGCACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACAT
TCCATCGTGTTATCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAA
GGCAATGGAACTGGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGA
GAACTTCAAATTGTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATG
CAGGTCCCAACACTAATGGCAGCCAATTTTTCATTTGTACGGTCAAGACA
CCATGGCTAGATCAGAGGCATGTTGTCTTTGGGCAAGTTTTGGAGGGCAT
GGACATTGTT
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