CN188527

Overview
NameCN188527
Unique NameCN188527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 49/123 (39.84%), Postives = 64/123 (52.03%), Query Frame = 3
Query:  330 VGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLE 695
            +   +G I + L  +  P+   NF  L   +KG+ YK  TFHR IK FMIQ             SI+G+ F DE    L H   G +SMAN G NTN SQFFI     P L+ +H +FG V++
Sbjct:  304 ISTTSGDINLELQTEYAPKAVWNFIKLA--KKGY-YKDVTFHRNIKGFMIQGGDPSGTGRGGE-SIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 422          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 3
Query:  345 GRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLE 695
            G + + L+ +  P+   NF  L   +KG+ YK  TFHR IK FMIQ             SI+G+ F DE    L H   G +SMAN G NTN SQFFI     P L+ +H +FG V++
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKGY-YKDVTFHRNIKGFMIQGGDPTGTGRGGE-SIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 435          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 43/106 (40.57%), Postives = 56/106 (52.83%), Query Frame = 3
Query:  300 VYFDVSIG-NPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSM 593
            VY D+ I  +P+G    R++  LY D  P+T  NF+ LCTG  GF        YK S FHRV+++  IQ             SIYG TF+DENF + H   GV+ M
Sbjct:  146 VYLDICIDLSPIG----RLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 689
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGTGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 689
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             S+YG  FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGTGGE-SVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 689
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGTGGE-SIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 689
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAG + NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGSGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 689
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAG + NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGSGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  342 AGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 689
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAG + NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGSGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11
Identity = 50/144 (34.72%), Postives = 71/144 (49.31%), Query Frame = 3
Query:  276 LQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK---LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG 698
            ++S+ ++K Y  +S         G + + L+    P+T  NF  LC   K   Y  + FHR I  FMIQ             SI+   F+DE  +     H   GV+SMAN G +TN SQFFI     P LD +H VFG++++G
Sbjct:  285 IKSRPSSKAYVRLSTN------FGALNLELHCGKAPKTCFNFLQLCKHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGGS-SIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDG 418          
The following BLAST results are available for this feature:
BLAST of CN188527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
PPIL2_ASPOR9.250e-1339.84Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU9.250e-1340.68Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL6_MOUSE1.208e-1240.57Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
SDC10_MOUSE1.578e-1238.46Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT2.061e-1237.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_BOVIN2.691e-1238.46Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
SDC10_PONAB1.336e-1137.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA1.336e-1137.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN1.336e-1137.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
PPIL2_USTMA2.278e-1134.72Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188527 ID=CN188527; Name=CN188527; organism=Citrus sinensis; type=EST; length=710bp
GCGGTTCCATTCCATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATA
AATGTAGGCTGGGTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCC
CTCGCGTAATGCAATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAA
ATGCTTCATCATCCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTT
CCCCCTCTCACTCATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGT
TCGGGCCAGTGCTGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAG
TTTATTTCGATGTGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGA
ATCGTGATTGGATTGTACGGTGATGATGTGCCCCAAACGGCAGAGAACTT
CCGTGCTTTATGCACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACAT
TCCATCGTGTTATCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAA
GGCAATGGAACTGGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGA
GAACTTCAAATTGTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATG
CAGGTCCCAACACTAATGGCAGCCAATTTTTCATTTGTACGGTCAAGACA
CCATGGCTAGATCAGAGGCATGTTGTCTTTGGGCAAGTTTTGGAGGGCAT
GGACATTGTT
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