CN188527

Overview
NameCN188527
Unique NameCN188527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9798 contig Csv1_Contig9798:60..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.548e-44
Identity = 89/138 (64.49%), Postives = 101/138 (73.19%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KV+FDVS  +   K  GRIV+ L  D VPQTAENFRALCTGEKGFGYKG +FHRVI +FM+Q             SIYG  F+DENF L H GPG +SMANAGPNTNGSQFFI T+K  WLD +HVVFG+V EGMD+V
Sbjct:    5 KVFFDVSANS---KPLGRIVMELRADVVPQTAENFRALCTGEKGFGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.940e-44
Identity = 90/139 (64.75%), Postives = 102/139 (73.38%), Query Frame = 3
Query:  297 KVYFDVSI-GNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +V+FD+S  G PVG    RIV+ L  D VP+TAENFRALCTGEKGFGYKGS FHRVI +FM Q             SIYG  F+DENF+L H GPG++ MANAGPNTNGSQFFI T KT WLD RHVVFG V+EGMD+V
Sbjct:    5 RVFFDMSADGQPVG----RIVMELRSDVVPKTAENFRALCTGEKGFGYKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 92/141 (65.25%), Postives = 102/141 (72.34%), Query Frame = 3
Query:  288 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            VT KV+FDV IG+   K  GRIVIGL+G  VP+T ENF AL TGEKG+GYKGS FHRVIKDFMIQ             SIYG TF DENFKL H G G VSMANAGP+TNGSQFFI   K  WLD +HVVFG+VL+GM +V
Sbjct:   36 VTAKVFFDVRIGD---KDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVV 173          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.013e-43
Identity = 90/145 (62.07%), Postives = 102/145 (70.34%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KV+FDVSIG    + AGR+ + L+ D VP+TAENFRALCTGEKG G       +KGS FHR+I +FMIQ             SIYG  FKDENF L H GPG +SMANAGPNTNGSQFFICTV TPWLD  HVVFGQV +GM +V
Sbjct:   23 KVFFDVSIGE---EPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVV 164          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 91/141 (64.54%), Postives = 102/141 (72.34%), Query Frame = 3
Query:  288 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            VT KV+FDV IG+   K  GRIVIGL+G  VP+T ENF AL TGEKG+GYKGS FHRVIKDFMIQ             SIYG TF DENFKL H G G VSMANAGP+TNGSQFFI   K  WLD +HVVFG+V++GM +V
Sbjct:   36 VTAKVFFDVRIGD---KDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVV 173          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 90/147 (61.22%), Postives = 106/147 (72.11%), Query Frame = 3
Query:  270 ADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            A+  +++T+KVYFD+  G    +  G+IV+GLYGD VP+T ENFRALCTGE G GYKGS FHRVIK+FMIQ             SIYGR F DENF+L H  P  +SMANAG +TNGSQFFI TV T WLD +HVVFG+VLEG DIV
Sbjct:   24 AEPDAEITHKVYFDIKQGE---ESLGKIVMGLYGDVVPKTVENFRALCTGETGKGYKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIV 167          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 89/145 (61.38%), Postives = 104/145 (71.72%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KV+FD++IG   GK  GRIV+ LY D VP+TAENFRALCTGEKG G       +KGS FHR+I +FMIQ             SI+G  F DENFK  H GPGV+SMAN G NTNGSQFF+CTVKT WLD +HVVFG+V+EGMD+V
Sbjct:    5 KVFFDITIG---GKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVV 146          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 89/145 (61.38%), Postives = 103/145 (71.03%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KVYFD+++G   GK AGRIV+ LY D  P+TAENFRALCTGE+G G       YKGS+FHRVI  FM Q             SIYG  FKDENF   H GPG++SMANAG NTNGSQFFICT KT WLD +HVVFGQV+EG+++V
Sbjct:    6 KVYFDMTVG---GKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVV 147          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.728e-43
Identity = 88/139 (63.31%), Postives = 100/139 (71.94%), Query Frame = 3
Query:  294 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            ++VY D+ IGN    LAGRI I L GD VP+TAENFRALCTGE GFGYK S+FHR+I  FM Q             SIYG  F+DENF L H GPG +SMANAG NTNGSQFFICT KT WLD +HVVFGQV+ GM++V
Sbjct:  155 SRVYLDIQIGNT---LAGRIEIELRGDVVPKTAENFRALCTGEAGFGYKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVV 290          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.257e-43
Identity = 86/138 (62.32%), Postives = 102/138 (73.91%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +V+FD++  N   +  GRIV+ L  D VP+TAENFRALCTGEKGFGYKGS FHRVI +FM Q             SIYG  F DENF+L H G G++SMANAG NTNGSQFFICTVKT WLD +HVVFG+V+EG+D+V
Sbjct:   68 RVFFDMTADN---EPLGRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVV 202          
The following BLAST results are available for this feature:
BLAST of CN188527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
PPIA1_RHIOR4.548e-4464.49Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIA_BLAGE5.940e-4464.75Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIC_BOVIN7.758e-4465.25Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
CYP1_CAEEL1.013e-4362.07Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
PPIC_HUMAN1.323e-4364.54Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIB_YARLI1.323e-4361.22Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
CYP2_CAEEL1.323e-4361.38Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CP19A_ARATH1.323e-4361.38Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
PPIE_RHIOR1.728e-4363.31Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIA_DROME2.257e-4362.32Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188527 ID=CN188527; Name=CN188527; organism=Citrus sinensis; type=EST; length=710bp
GCGGTTCCATTCCATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATA
AATGTAGGCTGGGTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCC
CTCGCGTAATGCAATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAA
ATGCTTCATCATCCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTT
CCCCCTCTCACTCATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGT
TCGGGCCAGTGCTGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAG
TTTATTTCGATGTGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGA
ATCGTGATTGGATTGTACGGTGATGATGTGCCCCAAACGGCAGAGAACTT
CCGTGCTTTATGCACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACAT
TCCATCGTGTTATCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAA
GGCAATGGAACTGGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGA
GAACTTCAAATTGTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATG
CAGGTCCCAACACTAATGGCAGCCAATTTTTCATTTGTACGGTCAAGACA
CCATGGCTAGATCAGAGGCATGTTGTCTTTGGGCAAGTTTTGGAGGGCAT
GGACATTGTT
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