CN188527

Overview
NameCN188527
Unique NameCN188527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9798 contig Csv1_Contig9798:60..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42
Identity = 88/140 (62.86%), Postives = 100/140 (71.43%), Query Frame = 3
Query:  294 NKVYFDVSI-GNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            ++VYFDV   G P+G    R+V  LY D VP+TAENFRALCTGEKGFGY GS FHRVI DFM+Q             SIYG  F DENFK  H  PG++SMANAGPNTNGSQFFI TV  PWLD +HVVFG+V++G DIV
Sbjct:    2 SQVYFDVEADGQPIG----RVVFKLYNDIVPKTAENFRALCTGEKGFGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIV 137          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42
Identity = 87/145 (60.00%), Postives = 101/145 (69.66%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KV+FD++IG   G  AGR+V+ L+ D  P+TAENFRALCTGEKG G       YKGSTFHRVI  FM Q             SIYG  F DENF   H GPG++SMANAGP TNGSQFFICT KT WL+ +HVVFGQV+EGMD++
Sbjct:    5 KVFFDLTIG---GAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVI 146          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42
Identity = 88/145 (60.69%), Postives = 102/145 (70.34%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +V+FD+S+G   G+ AGRIV+ L+ D  P+TAENFRALCTGEKG G       YK S+FHRVI  FM Q             SIYG  F DENF   H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFGQV+EGMD+V
Sbjct:    5 RVFFDMSVG---GQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVV 146          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 85/141 (60.28%), Postives = 99/141 (70.21%), Query Frame = 3
Query:  288 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V   V+FD++     G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS+FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V EGM IV
Sbjct:    2 VNPTVFFDITAD---GEPLGRVCFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 85/141 (60.28%), Postives = 99/141 (70.21%), Query Frame = 3
Query:  288 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V EGM+IV
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 85/141 (60.28%), Postives = 99/141 (70.21%), Query Frame = 3
Query:  288 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V EGM+IV
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 2.496e-42
Identity = 84/137 (61.31%), Postives = 97/137 (70.80%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG V EGM+IV
Sbjct:    6 VFFDIAVD---GEPLGRVSFDLFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.261e-42
Identity = 84/141 (59.57%), Postives = 100/141 (70.92%), Query Frame = 3
Query:  288 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            V   V+FD++  +   +  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS+FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V EGM+IV
Sbjct:    2 VNPTVFFDITADD---EPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIV 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.239e-41
Identity = 87/136 (63.97%), Postives = 98/136 (72.06%), Query Frame = 3
Query:  303 YFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +FDV I N  G+  GRIV  L+ D VP+TA NFRALCTGEKG+GY GSTFHRVI  FM+Q             SIYG  F DENF L H  PG++SMANAGPNTNGSQFFI TV TPWLD +HVVFG+V EGMD+V
Sbjct:    5 FFDV-IAN--GQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVV 137          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 86/137 (62.77%), Postives = 96/137 (70.07%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            VYFDVS     G+  G+I   LY D VP+TAENFRALCTGEKGFGYKGS FHRVI  FM+Q             SIYG  F DENF   H  PG++SMANAGPNTNGSQFFI TV  PWLD +HVVFG+V +G+DIV
Sbjct:    4 VYFDVSAD---GQKLGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIV 137          
The following BLAST results are available for this feature:
BLAST of CN188527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
CYPH_YEAST1.120e-4262.86Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CYPH_SOLLC1.120e-4260.00Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_CATRO1.120e-4260.69Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
PPIA_RAT1.911e-4260.28Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_PIG1.911e-4260.28Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN1.911e-4260.28Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIA_FELCA2.496e-4261.31Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIA_MOUSE7.261e-4259.57Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
CYPH_SCHPO1.239e-4163.97Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPIA_CANAL1.618e-4162.77Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188527 ID=CN188527; Name=CN188527; organism=Citrus sinensis; type=EST; length=710bp
GCGGTTCCATTCCATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATA
AATGTAGGCTGGGTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCC
CTCGCGTAATGCAATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAA
ATGCTTCATCATCCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTT
CCCCCTCTCACTCATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGT
TCGGGCCAGTGCTGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAG
TTTATTTCGATGTGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGA
ATCGTGATTGGATTGTACGGTGATGATGTGCCCCAAACGGCAGAGAACTT
CCGTGCTTTATGCACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACAT
TCCATCGTGTTATCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAA
GGCAATGGAACTGGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGA
GAACTTCAAATTGTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATG
CAGGTCCCAACACTAATGGCAGCCAATTTTTCATTTGTACGGTCAAGACA
CCATGGCTAGATCAGAGGCATGTTGTCTTTGGGCAAGTTTTGGAGGGCAT
GGACATTGTT
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