CN188527

Overview
NameCN188527
Unique NameCN188527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9798 contig Csv1_Contig9798:60..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 89/146 (60.96%), Postives = 102/146 (69.86%), Query Frame = 3
Query:  297 KVYFDVSI-GNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KV+FD++I GNP    AGRIV+ LY D  P+TAENFRALCTGEKG G       YKGSTFHRVI +FM Q             SIYG  F DENF   H GPG++SMANAG  TNGSQFFICT KT WLD +HVVFG+V+EGM++V
Sbjct:    5 KVFFDMAIAGNP----AGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVV 146          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 88/160 (55.00%), Postives = 107/160 (66.88%), Query Frame = 3
Query:  231 MGTRSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            M  RS+++ S   ++  S++  KV+FD ++    G   GRI   LY + VP+TAENFRALCTGEKG+GYKG  FHR+I DFMIQ             SIYG  F DENF   H   G++SMANAGPNTNGSQFFI TV  PWLD +HVVFG+V +GMDIV
Sbjct:    1 MFKRSIIQQSRLFSNSASRLGKKVFFDPAVN---GTKIGRIEFELYDNVVPKTAENFRALCTGEKGWGYKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIV 157          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.707e-41
Identity = 88/146 (60.27%), Postives = 102/146 (69.86%), Query Frame = 3
Query:  294 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            ++V+FD++IG   GK AGRIV  LY D VP+TAENFRALCTGEKG G       YKGSTFHRVIK FMIQ             SIYG  F+DENF+L H  P ++SMANAGP TNGSQFF+ TV TP LD +HVVFG+VL G  +V
Sbjct:   12 SRVFFDITIG---GKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVV 154          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.147e-41
Identity = 84/138 (60.87%), Postives = 96/138 (69.57%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +V+FD+      G+  GRIV+ L  D VP+TAENFRALCTGEKGFGYKGSTFHRVI  FM Q             SIYG  F DENF L H  PG++SMANAG NTNGSQFFICT  T WLD +HVVFG V +G+DI+
Sbjct:    5 QVFFDLQAN---GENLGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDII 139          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.028e-41
Identity = 85/137 (62.04%), Postives = 97/137 (70.80%), Query Frame = 3
Query:  300 VYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            VYFD+SI    GK AGRI   L+ D VP+TA+NFRALCTGE+GFGYKGS FHRVI  FM+Q             SIYG  F DENFKL H  PG++SMANAGPNTNGSQFFI TV   WLD  HVVFG+V + M++V
Sbjct:    3 VYFDISID---GKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELV 136          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.049e-40
Identity = 85/145 (58.62%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +V+FD++IG   G  AG++V+ LY + VP+TAENFRALCTGEKG G       YKGS+FHRVI +FM Q             SIYG  F DENFKL H G G +SMANAG NTNGSQFFIC   T WLD +HVVFG V EGMD+V
Sbjct:   13 RVFFDITIG---GVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVV 154          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.369e-40
Identity = 84/144 (58.33%), Postives = 100/144 (69.44%), Query Frame = 3
Query:  279 QSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            Q +   +V+FD+ IGN     AGRIV+ L  D VP+TAENFRALCTGE+GFGY    FHRVI  FM Q             SIYGR F DENF+L H G GV+SMAN+GPNTNGSQFFICT K  WLD +HVVFG+V++G ++V
Sbjct:  107 QKRNLPRVFFDIRIGNGD---AGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVV 247          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40
Identity = 83/149 (55.70%), Postives = 102/149 (68.46%), Query Frame = 3
Query:  264 EVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            E A  +++   +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++SMAN+GPNTNGSQFF+   KT WLD +HVVFG+V EG+D++
Sbjct:  130 EPAAKKARSNPQVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVL 275          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40
Identity = 82/145 (56.55%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            KV+FD+ IG      AGR+V+ L+ D  P+TA NFRALCTGE G G       YKGS FHR+I  FM Q             SIYG  F+DENFKL H GPG++SMAN+GPNTNGSQFFICT KT WLD +HVVFG+V++G ++V
Sbjct:    5 KVFFDILIGK---MKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVV 146          
BLAST of CN188527 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.204e-40
Identity = 81/138 (58.70%), Postives = 97/138 (70.29%), Query Frame = 3
Query:  297 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIV 710
            +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++SMAN+GPNTNGSQFF+   KT WLD +HVVFG+V EG+D++
Sbjct:  141 QVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVL 275          
The following BLAST results are available for this feature:
BLAST of CN188527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
CYPH_LUPLU1.618e-4160.96Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPC_YEAST1.618e-4155.00Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
PPID_NEUCR4.707e-4160.2741 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIA_HEMPU6.147e-4160.87Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIA2_RHIOR8.028e-4162.04Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIA_DICDI1.049e-4058.62Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PPIE_SCHMA1.369e-4058.33Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPIE_PONAB2.336e-4055.70Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
CP19C_ARATH2.336e-4056.55Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIE_MOUSE5.204e-4058.70Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188527 ID=CN188527; Name=CN188527; organism=Citrus sinensis; type=EST; length=710bp
GCGGTTCCATTCCATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATA
AATGTAGGCTGGGTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCC
CTCGCGTAATGCAATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAA
ATGCTTCATCATCCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTT
CCCCCTCTCACTCATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGT
TCGGGCCAGTGCTGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAG
TTTATTTCGATGTGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGA
ATCGTGATTGGATTGTACGGTGATGATGTGCCCCAAACGGCAGAGAACTT
CCGTGCTTTATGCACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACAT
TCCATCGTGTTATCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAA
GGCAATGGAACTGGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGA
GAACTTCAAATTGTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATG
CAGGTCCCAACACTAATGGCAGCCAATTTTTCATTTGTACGGTCAAGACA
CCATGGCTAGATCAGAGGCATGTTGTCTTTGGGCAAGTTTTGGAGGGCAT
GGACATTGTT
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