CN188523

Overview
NameCN188523
Unique NameCN188523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_ECO57 (Adenine phosphoribosyltransferase OS=Escherichia coli O157:H7 GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44
Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_ECO55 (Adenine phosphoribosyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44
Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_ECO45 (Adenine phosphoribosyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44
Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_ECO27 (Adenine phosphoribosyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44
Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_ECO24 (Adenine phosphoribosyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44
Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_AERS4 (Adenine phosphoribosyltransferase OS=Aeromonas salmonicida (strain A449) GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44
Identity = 82/157 (52.23%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            I ++I+ IPD+PKPGI+F+DIT+L+ + +AF+ TIDL  E Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  V + A +I LP L G  RL
Sbjct:    9 IEASIKTIPDYPKPGILFRDITSLIENAEAFKATIDLLAEHYRDQGITKIVGTEARGFIFGAPVAFAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVADAAFIISLPSLGGDARL 165          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_YERPS (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=apt PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.264e-44
Identity = 82/160 (51.25%), Postives = 116/160 (72.50%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 590
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_KLEP3 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae (strain 342) GN=apt PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.264e-44
Identity = 83/157 (52.87%), Postives = 119/157 (75.80%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_CITK8 (Adenine phosphoribosyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=apt PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.264e-44
Identity = 82/160 (51.25%), Postives = 121/160 (75.62%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 590
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL ++
Sbjct:   11 LKNSIKSIHDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLAKQ 170          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_PHOPR (Adenine phosphoribosyltransferase OS=Photobacterium profundum GN=apt PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.958e-44
Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            I ++I+ I D+PKPGI+F+D+T+L+ D +A+R T+ + +ERY +  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP EVISE Y LEYGKD++E+HV A+  G++ L+VDDL+ATGGT+ A  +L  R+G  V + A VI LP++ G ERL
Sbjct:    2 IRNSIKSISDYPKPGILFRDVTSLMEDPEAYRATMQVLIERYSNTGITKVIGTEARGFLFGAPLALELGVGFVPVRKPGKLPREVISESYELEYGKDILEIHVDAIVEGDKVLLVDDLLATGGTIEATTKLARRLGGVVEDAAFVINLPDIGGAERL 158          
The following BLAST results are available for this feature:
BLAST of CN188523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ECO571.734e-4453.50Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO551.734e-4453.50Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO451.734e-4453.50Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO271.734e-4453.50Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO241.734e-4453.50Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_AERS41.734e-4452.23Adenine phosphoribosyltransferase OS=Aeromonas sal... [more]
APT_YERPS2.264e-4451.25Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_KLEP32.264e-4452.87Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]
APT_CITK82.264e-4451.25Adenine phosphoribosyltransferase OS=Citrobacter k... [more]
APT_PHOPR2.958e-4453.50Adenine phosphoribosyltransferase OS=Photobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D14_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188523 ID=CN188523; Name=CN188523; organism=Citrus sinensis; type=EST; length=756bp
GCGTTACTCACTGACTATAACCGGCGTTTTGAGTAGTGAGTGGTGACTCG
ACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCG
AATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAAC
CAGGGATTATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCT
TTTAGAGATACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACAT
CTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTA
TTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAG
CTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGA
TGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAA
TAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGG
CTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGA
ACTGCCAGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTG
TTCTTGTAAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTG
TGGACCATATGGGTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAAC
TTCATAAAACCATCTGGTAATATAAGAAGCAGTTTCATTGGCTTTTTATT
TTATTT
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