CN188523

Overview
NameCN188523
Unique NameCN188523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2672 contig Csv1_Contig2672:1..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_SALA4 (Adenine phosphoribosyltransferase OS=Salmonella agona (strain SL483) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.605e-44
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_DESHY (Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.605e-44
Identity = 87/162 (53.70%), Postives = 114/162 (70.37%), Query Frame = 3
Query:  123 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 608
            IRVI DFPKPGI F+DITTLL D +A+R  +D  VER ++    ++ G EARGF+ G P+A A+G  FVP+RKP KLPG+ +SE Y LEYG D +E+H  A+Q G+R  IVDDL+ATGGT SA  RL+E+ G  V   + +IEL  L+GR+RL    +F L+
Sbjct:   10 IRVIDDFPKPGISFKDITTLLKDGEAYRAAVDAIVERVRESQPDLIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKTVSETYELEYGSDTLEVHADAIQPGQRIAIVDDLLATGGTTSATARLIEKTGAQVAGMSFLIELGFLEGRKRLEGYEVFSLI 171          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_DESHD (Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.605e-44
Identity = 87/162 (53.70%), Postives = 114/162 (70.37%), Query Frame = 3
Query:  123 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 608
            IRVI DFPKPGI F+DITTLL D +A+R  +D  VER ++    ++ G EARGF+ G P+A A+G  FVP+RKP KLPG+ +SE Y LEYG D +E+H  A+Q G+R  IVDDL+ATGGT SA  RL+E+ G  V   + +IEL  L+GR+RL    +F L+
Sbjct:    7 IRVIDDFPKPGISFKDITTLLKDGEAYRAAVDAIVERVRESQPDLIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKTVSETYELEYGSDTLEVHADAIQPGQRIAIVDDLLATGGTTSATARLIEKTGAQVAGMSFLIELGFLEGRKRLEGYEVFSLI 168          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_CLOBB (Adenine phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.605e-44
Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 587
            +   IR+I  FPK GI F+DITTL+ D +  + +ID+FVE  KDKN+ ++ G EARGFIFG P+A A+GA FVP+RKP KLPGE IS  Y LEYG D +++H  +++ G+R  IVDDL+ATGGT+    +L+E  G  VV  A +IEL +LKGR++LG+
Sbjct:    3 LKEKIRIIDGFPKEGISFKDITTLIGDGEGLKASIDMFVEYLKDKNVDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISVNYDLEYGSDSLQIHKDSIKKGQRVAIVDDLLATGGTVEGVAKLVEEAGGEVVSLAFLIELIDLKGRDKLGD 161          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_SHEPW (Adenine phosphoribosyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.468e-43
Identity = 86/168 (51.19%), Postives = 120/168 (71.43%), Query Frame = 3
Query:  102 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 605
            +A I ++I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE YK++  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   ++ L+VDDL+ATGGT+ A ++L+  +G  V   A VI LP+L G +RL    L +L
Sbjct:    8 LALIKNSIKTIPDYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKEQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAITKEDKVLVVDDLLATGGTIEATVKLIRNLGGQVNHAAFVISLPDLGGEKRLETMDLELL 175          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_SALAR (Adenine phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.468e-43
Identity = 82/157 (52.23%), Postives = 117/157 (74.52%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK   I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYTLSIELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_CLOTE (Adenine phosphoribosyltransferase OS=Clostridium tetani GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.468e-43
Identity = 86/166 (51.81%), Postives = 117/166 (70.48%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 608
            +   IRVI  FPK GI F+D+TT+L + +AF+ TID  VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP   IS +Y LEYG D +EMH  +++ G+R +I DDL+ATGGT+ + I ++E +G  +V    +IEL +LKGRE+LG+  +  LV
Sbjct:    3 LKDKIRVIQGFPKEGISFKDVTTILQEKEAFKYTIDTLVEELKDKNVDVVVGPEARGFLFGAPLAYALGAGFVPVRKKGKLPSTTISSKYELEYGSDELEMHKDSIKPGQRVVIADDLLATGGTICSVIEMIESLGGEIVSINFLIELTDLKGREKLGKYDISSLV 168          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_ACIC5 (Adenine phosphoribosyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.468e-43
Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 608
            + S +R +PDFPKPGI+F DITTLL D + F   ID   E Y  KNI +V GIEARGFIFGP +A  + A FVP+RKP+KLP   +   Y LEYG D +E+H  A++ G+R ++VDDL+ATGGT+ A ++L+ ++G  +   A  +EL  LKGRER  +  +F L+
Sbjct:   12 LKSLVRTVPDFPKPGILFYDITTLLKDRQGFAKLIDALAEHYIGKNIDLVLGIEARGFIFGPALAYRLNAGFVPVRKPRKLPARTVRVTYDLEYGSDTLEIHEDAIEPGQRIVLVDDLLATGGTMEATVKLVRQLGGEIAGLAFAVELDFLKGRERFPDLDVFSLL 177          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_VIBCM (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=apt PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.917e-43
Identity = 81/157 (51.59%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of CN188523 vs. ExPASy Swiss-Prot
Match: APT_VIBCH (Adenine phosphoribosyltransferase OS=Vibrio cholerae GN=apt PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.917e-43
Identity = 81/157 (51.59%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  111 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 581
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
The following BLAST results are available for this feature:
BLAST of CN188523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALA48.605e-4452.23Adenine phosphoribosyltransferase OS=Salmonella ag... [more]
APT_DESHY8.605e-4453.70Adenine phosphoribosyltransferase OS=Desulfitobact... [more]
APT_DESHD8.605e-4453.70Adenine phosphoribosyltransferase OS=Desulfitobact... [more]
APT_CLOBB8.605e-4453.46Adenine phosphoribosyltransferase OS=Clostridium b... [more]
APT_SHEPW1.468e-4351.19Adenine phosphoribosyltransferase OS=Shewanella pi... [more]
APT_SALAR1.468e-4352.23Adenine phosphoribosyltransferase OS=Salmonella ar... [more]
APT_CLOTE1.468e-4351.81Adenine phosphoribosyltransferase OS=Clostridium t... [more]
APT_ACIC51.468e-4350.00Adenine phosphoribosyltransferase OS=Acidobacteriu... [more]
APT_VIBCM1.917e-4351.59Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_VIBCH1.917e-4351.59Adenine phosphoribosyltransferase OS=Vibrio choler... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D14_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188523 ID=CN188523; Name=CN188523; organism=Citrus sinensis; type=EST; length=756bp
GCGTTACTCACTGACTATAACCGGCGTTTTGAGTAGTGAGTGGTGACTCG
ACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCG
AATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAAC
CAGGGATTATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCT
TTTAGAGATACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACAT
CTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTA
TTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAG
CTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGA
TGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAA
TAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGG
CTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGA
ACTGCCAGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTG
TTCTTGTAAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTG
TGGACCATATGGGTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAAC
TTCATAAAACCATCTGGTAATATAAGAAGCAGTTTCATTGGCTTTTTATT
TTATTT
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