CN188519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.388e-31 Identity = 72/134 (53.73%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 55 MSLISNMLGDN---NEPFDPFLSLV---------------NKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 MSLI + G+N N FDPF V + N DWKET EAHVF ADLPG+KK+EVKVE+++ VL+ISGER + E DTWHRVER G+F R+FKLPEN K D+VKASMENGVL Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVL 134
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.388e-31 Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 91 EPFDP-FLSLV------NKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 +PFD F S+V + N DWKETPE+HVF ADLPG+KK+EVKVEV+EG VL ISG+R + E D WHRVER G+FMRRF+LPENAK D+VKA MENGVL Sbjct: 19 DPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVL 129
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.650e-31 Identity = 72/134 (53.73%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 55 MSLISNMLGD-NNEPFDPF-----------------LSLVNKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 MSLI ++ G + FDPF +S N V NT DWKET EAHV AD+PGLKK+EVKV++++ RVLQISGER + E DTWHRV+R G+FMRRF+LPENAK ++VKA MENGVL Sbjct: 1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFV-NTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVL 133
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.260e-30 Identity = 71/132 (53.79%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 55 MSLISNMLGDN----NEPFDPFLSLV------------NKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 MSLI + G+N N FDPF V + + N DWKET EAHVF ADLPG+KK+EVKVE+++ VL+ISGER + E DTWHRVER G F R+F+LPEN K D+VKASMENGVL Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 132
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.646e-30 Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 1 Query: 151 DWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 DWKETPE HVF AD+PGLKK+EVKVEVD+G +LQISGER + E D WHRVER G+F+RRF+LPEN K +++KASMENGVL Sbjct: 55 DWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 138
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.646e-30 Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 91 EPFDPFLSLV--------NKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 +PFD F S+V N DWKETPEAHVF DLPG+KK+EVKVEV++G VL +SGER + E D WHRVER G+F+RRF+LPE+AK +EVKA +ENGVL Sbjct: 19 DPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVL 130
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.646e-30 Identity = 67/111 (60.36%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 91 EPFDP-FLSLV------NKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 +PFD F S+V + N DWKETPE+HVF ADLPG+KK+EVKVEV+EG VL ISG+R + E D WHRVER G+FMRRF+LPENAK D+VKA +ENGVL Sbjct: 19 DPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVL 129
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.150e-30 Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 1 Query: 151 DWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 DWKETPEAHVF AD+PGLKK+EVKVEV++G VLQISGER + E D WHRVER G+F+RRF+LPEN K +++KASMENGVL Sbjct: 57 DWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 140
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 4.789e-30 Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 1 Query: 151 DWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 DWKETPEAHVF AD+PGLKK+EVKVEV++G VLQISGER + E D WHRVER G+F+RRF+LPEN K +++KASMENGVL Sbjct: 50 DWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.393e-29 Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 91 EPFDPFLSLV--------NKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 +PFD F S+V N DWKETPEAHVF ADLPG+KK+EVKVEV++G VL +SGER + E D WHRVER G+F+RRF+L E+AK +EVKA +ENGVL Sbjct: 19 DPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVL 130 The following BLAST results are available for this feature:
BLAST of CN188519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188519 ID=CN188519; Name=CN188519; organism=Citrus sinensis; type=EST; length=613bpback to top |