CN188519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 49/105 (46.67%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 145 PTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQI--SGER----------KADG----ESDGDTWHRVERCRGR---FMRRFKLPENAKTDEVKASMENGVL 402 P DW+ETP AHVF DLPGL KD+V VEV +G +L++ GE KA G E+DG WH ER GR + +F+LPE+A DE A M +GVL Sbjct: 28 PMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVL 132
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 151 DWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVER-----CRGRFMRRFKLPENAKTDEVKASMENGVL 402 DW E+ +H+F ++PG K+++KV+++EG VL I GE + + + WH ER F+RR +LPEN K D+VKA +ENGVL Sbjct: 25 DWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVL 113
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.160e-14 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 142 TPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 TP D KE A+ F D+PGL +++V+V++ RVL ISGER+ + D + R+ER G+FMR+F LP+NA D+V A +GVL Sbjct: 46 TPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREEREDA-KYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVL 131
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HSP19_ORYSJ (19.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP19.0 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 139 NTPTDWKE--TPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERK---ADGESDGD--TWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 NTP D KE A V D+PG+ +V+VEV++G VL ISGER+ DG+ G+ + R+ER G+FMRRF LPE+A D V+A ++GVL Sbjct: 48 NTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVL 142
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 151 DWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISG-------ERKADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 DW ETP +HV ++PGL KD+VKV+V++G VL + G E++ + E D WH ER R F R LP + ++++AS++NGVL Sbjct: 33 DWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKD-VVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVL 122
BLAST of CN188519 vs. ExPASy Swiss-Prot
Match: HS22C_CHLRE (Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11 Identity = 42/91 (46.15%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 139 NTPTDWKETPEAHVFTADLPGLKKDEVKVEVDEGRVLQISGERKADG---ESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVL 402 + P D E+P A AD PG+ D+VKVE+ EG VL ++GERK E+ G W R ER F R F LPENA D + A+M+ GVL Sbjct: 46 HAPMDIIESPTAFELHADAPGMGPDDVKVELQEG-VLMVTGERKLSHTTKEAGGKVW-RSERTAYSFSRAFSLPENANPDGITAAMDKGVL 134 The following BLAST results are available for this feature:
BLAST of CN188519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188519 ID=CN188519; Name=CN188519; organism=Citrus sinensis; type=EST; length=613bpback to top |