CN188516

Overview
NameCN188516
Unique NameCN188516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = -3
Query:  275 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKI 451
            +RC+ CR++VGLTGF CRCG  FCG HRY +RH C +D+K+AGRDAIAR NP+IK  K+
Sbjct:   92 SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKL 150          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = -3
Query:  266 QELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 505
            Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +ENPV+   KI ++
Sbjct:  129 QQASEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = -3
Query:  266 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 451
            +RC+ C ++VGLTGF+CRCG LFCG HRY+D HDCS++Y +A ++AIA+ NPV+KA K+ ++
Sbjct:  112 SRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = -3
Query:  266 QELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 505
            Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +ENPV+   KI ++
Sbjct:  144 QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = -3
Query:  266 QELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 505
            Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +ENPV+   KI ++
Sbjct:  144 QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18
Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = -3
Query:  269 IIKFSSEKSLRSRP-----------IIRSGSSDAAGTTGQNQELTDRREKEANVEKRVV--NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 595
            + K + EKS +  P           ++     + A     + E +     EAN   R    NRC  C +KVG+ GF+C+CG  FCGEHRY + HDCS+D+K  GR  IA+ NPV+KA KI R
Sbjct:   54 VAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = -3
Query:  266 IIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 553
            ++ SGSS ++   G      D      +  K    RC  C +KVG+TGF+CRCG  FCG HRY + H+C +D+K   R+AIA+ NPV+KA K+ R+
Sbjct:   79 VLGSGSSSSSTRGG------DSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = -3
Query:  266 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 451
            NRC+ CR++VGLTGF CRCG  FCG HRY + H C++D+KSAGR+ IA+ NP++ AAK+ ++
Sbjct:  100 NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = -3
Query:  275 SGSSDAAGTTGQNQELTDRREKEANVEKRV-VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKI 544
            S S  +A   G      +  E    VEK+   NRC+ C++KVGL GF CRCG  +CG HRY ++H C +D+K A RDAIAR NP+IK  K+
Sbjct:  261 SCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 351          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = -3
Query:  269 TNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXAIIKFSSEKSLRSR-------PIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 703
            TNNMC KC+                              FSS  S  +        PI  + ++      G+ +E T      A    +  NRC  CR+KVGL GF CRCG  FC  HR++D+H C++D+K + R+ IA+ENP+I A KI +
Sbjct:   93 TNNMCSKCYRDHLKATSPL--------------------FSSSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAKP-NRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITK 223          
The following BLAST results are available for this feature:
BLAST of CN188516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP5_ORYSJ5.043e-1964.41Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_BOVIN6.586e-1948.75AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP2_ARATH8.601e-1958.06Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT1.123e-1848.75AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE1.123e-1848.75AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
SAP9_ARATH1.123e-1839.34Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH1.123e-1842.71Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH3.269e-1858.06Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ORYSJ3.269e-1847.25Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP12_ORYSJ9.510e-1833.55Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188516 ID=CN188516; Name=CN188516; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTAACCTAAAACCACAATAATCCTCTTTCTATTTC
TGAAGAAACAAACCTCTAGAAAAGAAAGAAAATTATAAATTATCGAAAGA
GAAACAATTCATAAATCTGATCAACTCTCTCTCTAAAACCCTCTTTCGAT
CCTTTGATCACCATATTCCTGAGGAAGAGATCTGGCGAAATGACATCGTT
TCATGATGTGTATAAATTGATCTGAATTTTTGACCTTTCAATCGTGTTTT
CAAATTAAGCTTTCAAACTCTAACGATCTTGGCAGCTTTGATCACCGGAT
TTTCTCTCGCGATGGCGTCGCGACCGGCCGATTTATAATCATAGCTGCAA
TCGTGACGATCGGAGTACCGATGTTCGCCGCAGAACAGCTCCCCGCAGCG
ACATCTAAATCCGGTCAATCCAACCTTTCGTCGACAACCGGAGCACCGAT
TCACAACTCGTTTCTCTACGTTGGCTTCCTTCTCTCGCCGATCCGTCAAC
TCCTGATTTTGACCGGTCGTACCGGCAGCATCGGATGACCCAGACCGGAT
GATAGGCCGAGATCTCAAAGATTTCTCGCTAGAAAACTTTATGATCGCTA
CACCGCTTCCTCCGCCGCCGCCGCCGCCCGTACTCGAACCAGCAACGGCG
CTTGCGGTGGTGGTAGCGGTTGCGTTGAAACATTTCTGGCACATATTATT
TGTGGCTGGATTTC
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