CN188514

Overview
NameCN188514
Unique NameCN188514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2670 contig Csv1_Contig2670:1..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188514 vs. ExPASy Swiss-Prot
Match: EAS_DROME (Ethanolamine kinase OS=Drosophila melanogaster GN=eas PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23
Identity = 59/164 (35.98%), Postives = 90/164 (54.88%), Query Frame = -3
Query:  157 LKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIDYEYASYNPVAYDLANHFCEMAANYHSDTPHILDYSLYPGLEDRQRFIKTYLSSAEKQPS--ETEVNQLVDDAEKYTLANHIFWGLWGLISAYVNKIDFNYKEYARQRFQQYWMKKQELLS 642
            L++E + L + L      I F HNDL  GN++  +  +++  IDYEYA YN  A+D+ NHF EM           +DYS YP  E + ++++ YL    ++ +    EV  L     ++ LA+HIFW +W L+ A  + IDF+Y  YA  R+ +Y  +K E LS
Sbjct:  353 LREEFNKLYEYLEALDSPIVFSHNDLLLGNVIYTQSLNTVNFIDYEYADYNFQAFDIGNHFAEMCG------VDEVDYSRYPKREFQLQWLRVYLEEYLQRSNIQNDEVELLYVQVNQFALASHIFWTVWSLLQAEHSTIDFDYVGYAFLRYNEYLARKVEFLS 510          
BLAST of CN188514 vs. ExPASy Swiss-Prot
Match: CHKA_HUMAN (Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 56/176 (31.82%), Postives = 94/176 (53.41%), Query Frame = -3
Query:  163 YTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDE-----ETSSITIIDYEYASYNPVAYDLANHFCEMAANYHSDTPHILDYSL--YPGLEDRQRFIKTYLSSAEK--QPSETEVNQLVDD-----AEKYTLANHIFWGLWGLISAYVNKIDFNYKEYARQRFQQYWMKKQEL 648
            Y L  E+  L   L +    + FCHND Q GNI++ E     E   + +ID+EY+SYN   +D+ NHFCE   +Y  +       ++  YP  + +  FI +YL + +   +   TE   ++ +       ++ LA+H  WGLW ++ A ++ I+F Y +YA+ RF  Y+ +K++L
Sbjct:  280 YNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFDAYFHQKRKL 455          
BLAST of CN188514 vs. ExPASy Swiss-Prot
Match: EKI2_HUMAN (Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = -3
Query:  286 PKVSVLLKMQRNSAWYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIDYEYASYNPVAYDLANHFCEMAANYHSDTPHILDYSLYPGLEDRQRFIKTYLSSAEKQPSET--EVNQLVDDAEKYTL 693
            PKV VL   +R  AW  LK+ +S LE         + FCHNDL   NI+ D     +  IDYEYA YN  A+D+ NHF E A        + +DY LYP  E + +++  YL  A+K  + T  EV +L     K+ L
Sbjct:  220 PKVEVL---ERELAW--LKEHLSQLESP-------VVFCHNDLLCKNIIYDSIKGHVRFIDYEYAGYNYQAFDIGNHFNEFAG------VNEVDYCLYPARETQLQWLHYYL-QAQKGMAVTPREVQRLYVQVNKFAL 338          
BLAST of CN188514 vs. ExPASy Swiss-Prot
Match: EKI1_YEAST (Ethanolamine kinase OS=Saccharomyces cerevisiae GN=EKI1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12
Identity = 41/129 (31.78%), Postives = 65/129 (50.39%), Query Frame = -3
Query:  244 NDHQEIGFCHNDLQYGNIMI------DEETSSITIIDYEYASYNPVAYDLANHFCEMAANYHSDTPHILDYSLYPGLEDRQRFIKTYLSSAEK---QPSETEVNQLVDDAEKYTLANHIFWGLWGLISA 603
            N   ++ FCHNDLQ+GN++       D     +TIID+EYA  NPV +DL+NH  E   +Y+           YP  ED   F ++Y++   +   + +  EV  L +   ++     +FW LW L+ +
Sbjct:  318 NSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQS 446          
BLAST of CN188514 vs. ExPASy Swiss-Prot
Match: KICH_YEAST (Choline kinase OS=Saccharomyces cerevisiae GN=CKI1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 44/174 (25.29%), Postives = 70/174 (40.23%), Query Frame = -3
Query:  244 EKELPNDHQEIGFCHNDLQYGNIMI---------------------------------------------DEETSSITIIDYEYASYNPVAYDLANHFCEMAANY-HSDTPHILDYSLYPGLEDRQRFIKTYLS---SAEKQPSETEVNQLVDDAEKYTLANHIFWGLWGLISA 618
            E+ +   ++ + FCHND QYGN++                                                + S + +ID+EYA  NP AYDLANH  E   +Y ++  PH      YP  E    F+ +Y+S      K+P + EV +L     ++     +FW LW ++ +
Sbjct:  314 EQGIEQVNKNLIFCHNDAQYGNLLFTAPVMNTPSLYTAPSSTSLTSQSSSLFPSSSNVIVDDIINPPKQEQSQDSKLVVIDFEYAGANPAAYDLANHLSEWMYDYNNAKAPHQCHADRYPDKEQVLNFLYSYVSHLRGGAKEPIDEEVQRLYKSIIQWRPTVQLFWSLWAILQS 487          
BLAST of CN188514 vs. ExPASy Swiss-Prot
Match: KICB1_CAEEL (Choline kinase B1 OS=Caenorhabditis elegans GN=ckb-1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 51/172 (29.65%), Postives = 82/172 (47.67%), Query Frame = -3
Query:  169 LKDEISMLEK---ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIDYEYASYNPVAYDLANHFCEMAANYHSDTPHILDYS--LYPGLEDRQRFIKTYLSSAEKQPS------ETEVNQLVDDAEKYTLANHIFWGLWGL---ISAYVNKIDFNYKEYARQRFQQYWMKKQ 642
            L  EI  +EK   EL  D   + FCHNDL   NI+    T  + +ID+E+ SYN   +DLA H  E AA++   TP  +  S  L     + Q F + Y+ +  K  +      + EV+ L+ + + +     +FW  + +   +  Y   +D + +  A+ RF  YW  K+
Sbjct:  190 LYKEIDFMEKWTNELFED--TVVFCHNDLASSNILELNSTKELVLIDWEFGSYNCRGFDLAMHLAETAADFRDSTPPGIRISEELTDNPPNLQGFCEAYVDADNKLKNRVPSNRDLEVSNLICECQFFWPITQLFWACFVMKLALLKYNCGVDMDVQ--AQDRFAVYWHLKE 357          
The following BLAST results are available for this feature:
BLAST of CN188514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
EAS_DROME8.007e-2335.98Ethanolamine kinase OS=Drosophila melanogaster GN=... [more]
CHKA_HUMAN1.366e-2231.82Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 ... [more]
EKI2_HUMAN4.404e-1338.41Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=... [more]
EKI1_YEAST3.728e-1231.78Ethanolamine kinase OS=Saccharomyces cerevisiae GN... [more]
KICH_YEAST1.085e-1125.29Choline kinase OS=Saccharomyces cerevisiae GN=CKI1... [more]
KICB1_CAEEL5.383e-1129.65Choline kinase B1 OS=Caenorhabditis elegans GN=ckb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188514 ID=CN188514; Name=CN188514; organism=Citrus sinensis; type=EST; length=737bp
AGTCAGTTATGTTCATAATTCCTTAGTAGGCGTACTAAAGCTTTGATAAA
TACATTTTCCCTTTCATTTTACTCAAATTCATCAAGAATCTGACACTTTC
TTTAGGCTTATGCTGACGTGTCCATTTACATTTATTTTCTGGCGAATGGT
TGAGGAGCTCAAGAGTTCTTGCTTTTTCATCCAGTACTGCTGAAATCTTT
GCCTTGCATATTCCTTGTAATTGAAATCGATTTTGTTCACATAAGCCGAA
ATTAGTCCCCATAAGCCCCAGAAGATATGGTTTGCAAGAGTATATTTCTC
TGCATCATCAACCAGCTGATTTACTTCAGTTTCGCTGGGTTGCTTCTCTG
CAGAACTAAGGTATGTCTTGATAAATCTTTGACGATCCTCCAGGCCTGGG
TATAAGCTATAGTCCAGAATGTGAGGGGTATCAGAGTGGTAATTTGCTGC
CATTTCACAGAAGTGGTTCGCAAGGTCATATGCAACAGGATTGTAACTAG
CATACTCATAATCAATTATAGTAATTGAGCTGGTCTCTTCGTCAATCATA
ATGTTTCCATACTGAAGATCATTGTGACAAAAGCCAATCTCTTGATGGTC
ATTTGGCAACTCTTTCTCCAGCATACTGATTTCATCCTTCAGAGTATACC
AAGCAGAATTCCTTTGCATCTTTAGCAGAACAGAAACTTTTGGCCACACT
AACCCAATTCCTCAGTCTGTCCCATAGTAGTGCTTTC
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