CN188510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 290 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHW 676 N + +R+ KE L+ GISA P +N+ + I GP + Y G ++L L P YP AAP V+FLT +HPN+D G ICLDILKDKWS +RT+LLSIQ+LL PN + PL+ A W Sbjct: 30 NHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW 158
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 51/137 (37.23%), Postives = 88/137 (64.23%), Query Frame = -2 Query: 251 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 661 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P V+F+++++HPN+ G +CLDIL+++WSP + VL SIQ+LL+ PN + + +K N E + +E Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRE 143
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 50/137 (36.50%), Postives = 90/137 (65.69%), Query Frame = -2 Query: 251 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 661 RR++++ +R+ + G+SASP DN+ +N +I+GP +P+E G F+L L E+YP P V+F+++++HPN+ G +CLDIL+++WSP + ++L SIQ+LL+ PN P + A +K + ++ ++ +E Sbjct: 7 RRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRE 143
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.467e-26 Identity = 57/155 (36.77%), Postives = 94/155 (60.65%), Query Frame = -2 Query: 230 MANSNLP----RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 682 M++ NLP +R++KE + L S GI+ P E+++ ++ GP +PYEGG FK L L ++P + PK F+TKI+HPN+ K G IC++ LK W+ L ++ +LL+I+ LL PN + L+E+ ++ N + + AK +T ++AS Sbjct: 1 MSSENLPPDVIKRVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAKLFTSIHAS 155
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = -2 Query: 233 NLP----RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 670 NLP R++ KE L +P GI P+E+++ V I GP +PY GG+F+++L L +++P A PK FLTKI+HPN+ G IC+++LK W L IR VLL+I+ LL PNP+ L+E + N E A+ T ++A Sbjct: 7 NLPPHVIRQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 275 ANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA 679 A + +R+ +E L++ GISA P DN+ + I G + YE +KL L P YP AP V+FLT YHPN+D G ICLDILKDKWS +RT+LLSIQ+LL PN D PL+ + A+ WK A Sbjct: 27 ARGPVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 275 ANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA 679 A + +R+ +E L+ GISA P DN+ + I G + YE +KL L P YP AP V+FLT YHPN+D G ICLDILKDKWS +RT+LLSIQ+LL PN D PL+ + A+ WK A Sbjct: 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = -2 Query: 278 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNE 670 ++ +R+ E L+ P+PGISA P DN+ + I G + YE FK+ L P +YP P V+F T+ +HPN+D G ICLDILKDKWSP +R++L+SIQ+LL PN + PL+ A W + Sbjct: 6 SVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQD 136
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 275 ANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA 679 A + +R+ +E L+ GISA P DN+ + I G + YE +KL L P YP AP V+FLT YHPN+D G ICLDILKDKWS +RT+LLSIQ+LL PN D PL+ + A+ WK A Sbjct: 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 278 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNE 661 +R+ E L+ PGISA P EDN+ + I G + +EG ++L L +YP +PKV+F T +HPN+D G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL+ A+ W E Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQE 166 The following BLAST results are available for this feature:
BLAST of CN188510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188510 ID=CN188510; Name=CN188510; organism=Citrus sinensis; type=EST; length=731bpback to top |