CN188510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24 Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 236 NLPRRII----KETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 670 NLP II KE L ++P GI P+E+++ V I GP +PY GG+F+++L L +++P + PK FLTKI+HPN+ G IC+++LK W+ L IR VLL+I+ LL PNP+ L+E + N E A+ T ++ Sbjct: 7 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24 Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 236 NLPRRII----KETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 670 NLP II KE L ++P GI P+E+++ V I GP +PY GG+F+++L L +++P + PK FLTKI+HPN+ G IC+++LK W+ L IR VLL+I+ LL PNP+ L+E + N E A+ T ++ Sbjct: 7 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = -2 Query: 272 KKQKKSILEMANSNLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 709 K + + + ++ +R+ E L+ PGISA P D N+ ++ I GP+ + YEG FK+ + P YP + P + F + ++HPN+D G ICLDILKDKWS ++T+LLS+Q+LL PN PL+ A+ W + E Sbjct: 15 KNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIE 161
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24 Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 236 NLPRRII----KETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 670 NLP II KE L ++P GI P+E+++ V I GP +PY GG+F+++L L +++P + PK FLTKI+HPN+ G IC+++LK W+ L IR VLL+I+ LL PNP+ L+E + N E A+ T ++ Sbjct: 7 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = -2 Query: 227 NLP----RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 670 NLP R + KE L ++P GI PSE+++ + I GP +PY GGVF++ L L +++P P+ FLTKI+HPN+ G IC+++LK W L +R VLL+I+ LL PNP+ L+E K + E A T ++A G Sbjct: 7 NLPPQVLRLVYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHAMG 158
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24 Identity = 60/146 (41.10%), Postives = 91/146 (62.33%), Query Frame = -2 Query: 233 RIIKETQRLLSEPA--PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET-AKEWTRLYA 658 R+ KE + + E P I + N+ + +I GP+++PYEGGVF+L +PE YP+ P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+ + ++ + + A+ +TRL A Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAA 152
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24 Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 272 KQKKSILEMANS----NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 706 +QK+ +M S ++ +R+ +E + LL PGI+A P DN+ + + GP + YE +KL L P +YP P V+F T +HPN+D+ G ICLDILK+ W+ + +RT+LLS+Q+LL PN PL+ A W +N+ E Sbjct: 14 RQKERPRDMTTSKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTE 161
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24 Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = -2 Query: 233 ANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK-WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 679 A+ + RR+ KE L P P I + +DN+ ++ LGP+ S Y GG F L P +YP P + F T+IYHPN D G +CL ILK + + P++++R+VL I LL PNPDDPL +IA+ ++ + + A+++ +A Sbjct: 4 ASPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.037e-23 Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = -2 Query: 233 SILEMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 694 S +E + + R++ KE L + P G+ P+E ++ I GP +PYEGG FK++L L +++P PK FLTKI+HPN+ K G IC++ LK W L ++ +LL+I+ LL PNP+ L+E K E A+ T ++A Sbjct: 5 SNVENLSPQIIRQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTEIHA 158
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23 Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = -2 Query: 224 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 661 R+++KE Q + S P GI +E ++ +I GP +PY G+F+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL PNP+ L+E K + + A+ T ++A A Sbjct: 17 RQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162 The following BLAST results are available for this feature:
BLAST of CN188510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188510 ID=CN188510; Name=CN188510; organism=Citrus sinensis; type=EST; length=731bpback to top |