CN188510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = -2 Query: 335 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 658 R+ KE P G + DN++ + + + G + Y ++L++ PE YPM AP+V F++ HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 19 RLQKELSEWQLNPPTGFRHKVT-DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSS 126
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 302 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK--IYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 682 MA +R+ KE + ++ P P I A P+EDN+ ++ +I GP +PY+GG + L P +YP P +R +T + PN R+CL D D W+P + T+L LLS D+ + +I Sbjct: 1 MATKQAHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNT----RLCLSMSDYHPDTWNPGWSVSTIL---NGLLSFMTSDEATTGSI 125
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = -2 Query: 296 GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDIL--KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAK 613 GI+A P ++M + V I G S ++G VF+L + EY A P V+F+T +HPN+D G+ C+D L +KW+ + ++LL++Q +LS P ++P++ A+ Sbjct: 23 GITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAAR 131
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 37/118 (31.36%), Postives = 63/118 (53.39%), Query Frame = -2 Query: 338 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLS 682 MA+ +R+ KE + + P P I A+P EDN+ ++ +I GP ++PYE G + L P +YP P +R LT + + R+CL D D W+P+ + T+L + + ++ Sbjct: 1 MASRQAYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMT 116
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 50/185 (27.03%), Postives = 80/185 (43.24%), Query Frame = -2 Query: 248 RRIIKETQRLLSEPAPGISASP------------SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT----------------------------------KIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEW 661 +R+++E + +L E SAS SEDN + + GPT + Y+ ++L++ +P YP PK F+ ++ HPNI G ICLDIL+ KW+PA + + L +I LL+ P P PL ++A K N+ +A + E+ Sbjct: 5 KRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEY 189
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = -2 Query: 305 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSEN 658 R+ KE + P G S DN++ + + + G + Y ++L++ PE YPM AP+V F HP+I G ICLD+L D WSPA+++ ++ LSI ++LS+ + +N Sbjct: 19 RLQKEFMEWQTNPPSGFKHRVS-DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDN 136
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = -2 Query: 296 GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAK 613 GI+A P ++M + V I G S ++G VF+L + EY A P V+F+T +HPN+D G+ C+D L + KW+ + ++LL++Q +LS P ++P++ A+ Sbjct: 23 GITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAAR 131
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = -2 Query: 299 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 682 MA+ +R+ KE + +++ P P I A+P EDN+ ++ +I GP +PYE G + L P +YP P +R +T + + R+CL D + W+PA + T+L LLS D+ + +++ Sbjct: 1 MASIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTIL---NGLLSFMTGDEQTTGSVS 126
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = -2 Query: 302 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 682 MA +R+ KE + ++ P P I A P+E+N+ ++ +I GP +PY+GG + L P +YP P +R +T + + R+CL D D W+P + T+L LLS D+ + +I Sbjct: 1 MATKQAQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATIL---NGLLSFMTGDESTTGSI 125
BLAST of CN188510 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = -2 Query: 335 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 658 R+ KE P G + DN++ + + + G + Y + L++ P+ YPM AP+V F+ HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 19 RLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 126 The following BLAST results are available for this feature:
BLAST of CN188510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188510 ID=CN188510; Name=CN188510; organism=Citrus sinensis; type=EST; length=731bpback to top |