CN188506

Overview
NameCN188506
Unique NameCN188506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.385e-35
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = -1
Query:  382 HHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 813
            ++V+ EG LLKP+MVTPG+E+  + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  257 NNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.095e-34
Identity = 79/146 (54.11%), Postives = 100/146 (68.49%), Query Frame = -1
Query:  382 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 816
            +++V  EG LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  214 ENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.440e-34
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = -1
Query:  382 HHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 813
            ++V+ EG LLKP+MVTPG+E   K +PE +A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  250 NNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.162e-34
Identity = 80/147 (54.42%), Postives = 97/147 (65.99%), Query Frame = -1
Query:  382 NDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 819
            +DHHV LEGTLLKPNMVT G   P K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  218 SDHHVYLEGTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.581e-33
Identity = 78/147 (53.06%), Postives = 95/147 (64.63%), Query Frame = -1
Query:  382 NDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 819
            +DHHV LEGTLLKPNMVT G   P K + E IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  218 SDHHVYLEGTLLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.065e-33
Identity = 77/146 (52.74%), Postives = 93/146 (63.70%), Query Frame = -1
Query:  382 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 816
            DHHV LEGTLLKPNMVTPG   P K + E +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.848e-33
Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = -1
Query:  382 LLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 789
            LLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.748e-32
Identity = 80/147 (54.42%), Postives = 99/147 (67.35%), Query Frame = -1
Query:  382 NDHHVLLEGTLLKPNMVTPGSEAPKVTP-EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 819
            +D+ VLLEG  LKPNMVT G +  + T  + I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  214 HDNGVLLEGASLKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.284e-32
Identity = 73/133 (54.89%), Postives = 93/133 (69.92%), Query Frame = -1
Query:  421 DHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 816
            +++V  EG LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  208 ENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN188506 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.137e-30
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = -1
Query:  517 HHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 813
            H++ LEGTLLKPNMVT G   PK  TPE IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN188506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC2_ARATH8.385e-3553.10Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA1.095e-3454.11Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH2.440e-3452.41Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALDOC_CARAU4.162e-3454.42Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE1.581e-3353.06Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE2.065e-3352.74Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALDOC_CHICK7.848e-3353.28Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF2_PLABA1.748e-3254.42Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALFC2_PEA2.284e-3254.89Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALF_LYMST2.137e-3067.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188506 ID=CN188506; Name=CN188506; organism=Citrus sinensis; type=EST; length=819bp
TTTTTTTTTTTTTTTTTGTCAAATACCTCTTCATTTATTCAGTGAATCAG
CCCATATATAATCACATGTGAGAAAGCAACGCATTAGAAAAGAACCGAAA
GCAATAAGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAAT
TTAGCGCCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATAAA
CAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAG
CTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGA
ATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAA
AGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACA
TGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGT
ACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCT
GGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTC
TGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGT
CTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCT
GCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGT
TGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGG
AGCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAA
GAAGGACATGGTGGTCATT
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