CN188501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 313.153 bits (801), Expect = 7.807e-85 Identity = 156/201 (77.61%), Postives = 179/201 (89.05%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 614 ACAAQTNATF K+A P LVQM+IG+GAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE SGDREVQRTMLELLNQLDGFSSDDR+KV+AATNR D+LDPAL+RSGRLDRKIE P PSE++RA+ILQIHSRKMT D+N++ELARSTD+FNGAQLKAV VEAGM+ALR + V HEDF EGI +VQA+K S+++YA Sbjct: 234 ACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA 434
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 8.631e-84 Identity = 152/201 (75.62%), Postives = 177/201 (88.06%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 614 ACAAQ+NATF K+A P LVQMFIGDGAKLVRDAF LAKEKSP IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGFSSDDR+KVIAATNR D LDPAL+RSGRLDRK+E P P+EEAR IL+IHSRKM + D+N+EELARSTD++NGA LK+VCVEAGM+ALR+ T++NHE F +GI++VQ +K +L Y+A Sbjct: 238 ACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 438
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.689e-77 Identity = 143/200 (71.50%), Postives = 170/200 (85.00%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 611 ACA++TNATF K+AGP LVQM+IGDGA+LVRDAF LAKE+ P IIFIDEIDAIG KR DS+ +GDREVQRTMLELLNQLDGFSS + +K+IAATNR DILDPAL+RSGRLDRKIE P P+ R RILQIH+RKM+V DVNF+ELARST+ FNGAQ KAVCVEAGM ALR++ TE++ DF +GI +V ++KK+ L Y+ Sbjct: 201 ACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDGIQEVLSRKKSKLLYF 400
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.696e-69 Identity = 136/176 (77.27%), Postives = 148/176 (84.09%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 539 ACAAQT ATF K+AGP LVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR K VEAGM+ALRR ATE Sbjct: 223 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALRRGATE 398
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 8.135e-58 Identity = 110/194 (56.70%), Postives = 141/194 (72.68%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A T+ATF ++ G L+Q ++GDG KLVR+ F++A E SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P + R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H DF + +V KKK Sbjct: 246 AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVMFKKK 439
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.388e-57 Identity = 109/194 (56.19%), Postives = 141/194 (72.68%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A T+ATF ++ G L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P + R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H DF + +V KKK Sbjct: 241 AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKK 434
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.367e-57 Identity = 109/194 (56.19%), Postives = 141/194 (72.68%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A T+ATF ++ G L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P + R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H DF + +V KKK Sbjct: 241 AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKK 434
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 8.994e-57 Identity = 107/194 (55.15%), Postives = 142/194 (73.20%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A QT+ATF ++ G L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI IH+ +MT+ DVN EL + DD +GA +KA+C EAG++ALR +V +EDF + V +KK Sbjct: 237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.175e-56 Identity = 107/194 (55.15%), Postives = 143/194 (73.71%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A QT+ATF ++ G L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +EDF + V KK+ Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQ 431
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.175e-56 Identity = 107/194 (55.15%), Postives = 143/194 (73.71%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A QT+ATF ++ G L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +EDF + V KK+ Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQ 431 The following BLAST results are available for this feature:
BLAST of CN188501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188501 ID=CN188501; Name=CN188501; organism=Citrus sinensis; type=EST; length=661bpback to top |