CN188501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.478e-14 Identity = 52/170 (30.59%), Postives = 94/170 (55.29%), Query Frame = 3 Query: 9 GAC-AAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF--SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 506 G C A+Q A F ++G LV ++G+G K+V+ +F +A+ + P ++FI ++D + S++S + V R ELL QLDG S ++ + V+ +T++ + +D +L R +++ +P P AR +I+ Q+ S+ D L + TD F+G + +C EA Sbjct: 514 GRCMASQLGAAFLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLL----LSSQLSEESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR--YFVKRLLVPLPDATARHQIISQLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEA 677
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.673e-13 Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF---------SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARA----RILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A A ++ + FF I+ L F+G+ KLVR F LAK+ SP IIF+DEID++ + R S+ + +R E L Q + R+ V+AATN +D A R R R+ +P P E R +L+ +++ + E + ++T+ ++G+ L A+ +A M LR Sbjct: 511 AVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR-SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLE---DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 46/171 (26.90%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A A + F + L + G+ KL F LA + PCIIF+DEID+ R + ++ + L + LD + ++ V+ ATNR +D A++R R+ + P+ R IL++ + +N +E+A ++ ++G+ LK +C +A M +R Sbjct: 148 ATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLD-TGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVR 315
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: YCF2_MESVI (Protein ycf2 OS=Mesostigma viride GN=ycf2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12 Identity = 54/195 (27.69%), Postives = 90/195 (46.15%), Query Frame = 3 Query: 99 VRDAFQLAKEKSPCIIFIDEIDAIGTKRFD-----------------SEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK-MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------VNHEDFNEGIIQVQAKKKASLNY 608 V D F+ + SPCI++IDEID+I +R + S ++ D++ T+L + L +DG+ + + +I ATNR + LD A+MR GR DR+I P E R IL+I R + D +A + NG L+ + +L+ + +N + F+ + +V + NY Sbjct: 426 VDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALERVSRIRHIISNY 620
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: YCF46_GRATL (Uncharacterized AAA domain-containing protein ycf46 OS=Gracilaria tenuistipitata var. liui GN=ycf46 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11 Identity = 52/168 (30.95%), Postives = 81/168 (48.21%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG-DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM--TVHPDVNFEELARSTDDFNGAQLKAVCVEA 506 A + Q N K+ + +G + +R + A++ SPCI++IDEID T+ + SG + V TML L++ + VIA N+ L L+R GR D L PS E R +I QIH K + + L++ TD F+GA+++ +EA Sbjct: 279 AISGQWNLPLLKLDMGKIFASLVGQSEERMRHMIKTAEQSSPCILWIDEIDKCFTRLNNYTDSGTNGRVLSTMLTWLSE-----KKKPVFVIATANQVLSLPSELLRKGRFDEIFFLNLPSLEEREKIFQIHLMKFRPLSWRKYDIKYLSKLTDQFSGAEIEQAIIEA 441
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11 Identity = 37/117 (31.62%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 192 EVSGDREVQRTMLE----LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 530 E S + EV++ L LL ++DG + + + V ATNR ++LDPAL+R GR D+ + + P ++ R IL+++++K+ +++E A T + A L A+ ++ +LA+ D Sbjct: 1489 ESSNEMEVEKNQLSALIRLLVEMDGLNPLNGVIVFGATNRPEVLDPALIRPGRFDQILPIELPGKQKRVEILKLYAKKLGTAKSISWEYFANRTVGLSAADLAAIMNQSTILAVFND 1605
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: Y4KL_RHISN (Uncharacterized AAA family ATPase y4kL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02840 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 53/193 (27.46%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 18 AAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 596 AA+ F++ L+ ++G+ A +R F+ A+ K PC++F DE DA+ R DS E++R + LL +D + IAATN LD A+ R R D + P R L++ + + V D A + ++ A+++ VC +A + +V DFN +Q +A+++A Sbjct: 139 AAELGLPLFRVKLDRLISSYLGETATNIRKTFEFAR-KQPCVLFFDEFDALARTRDDS--GEHNELRRVVNSLLLFIDNMQPKGFL--IAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFDPARNSAA--LEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRA-LQDEARRRA 321 The following BLAST results are available for this feature:
BLAST of CN188501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188501 ID=CN188501; Name=CN188501; organism=Citrus sinensis; type=EST; length=661bpback to top |