CN188501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.258e-50 Identity = 96/194 (49.48%), Postives = 135/194 (69.59%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A+Q + F K+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+AR IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 1.643e-50 Identity = 104/202 (51.49%), Postives = 134/202 (66.34%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R IL+IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.643e-50 Identity = 95/194 (48.97%), Postives = 136/194 (70.10%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A+Q + F K+ +V +IG+ A+++R+ F A++ PCI+F+DEIDAIG +RF S DRE+QRT++ELLNQLDGF S ++KVI ATNR D LDPAL+R GRLDRKIE+ P+E++R IL+IHS K+T H +++FE + + +D F+ A L+ VC EAGM A+R + V EDF + + +V K+ Sbjct: 203 AVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKR 396
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.802e-50 Identity = 101/185 (54.59%), Postives = 131/185 (70.81%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 563 A A QT+ATF ++ G L+Q ++GDG +LVR F A+E SP I+FIDEIDAIGTKR+D++ +RE+QRTMLELLNQLDGF + R IKVI ATNR LDPAL+R GR+DRKI +P E + +I IH+ KM + DVN EEL + DD +GA++KA+ EAG+LALR V +DF + Sbjct: 244 AVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQ 428
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50 Identity = 101/193 (52.33%), Postives = 136/193 (70.47%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 A A T+ TF +++G LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S GD EVQRTMLELLNQLDGF S IKV+ TNR DILDPAL+R GR+DRKIE P+P + R IL+IHSRKM + +N ++++ + +GA+LKAVC EAGM ALR V+ EDF + +V K Sbjct: 198 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKK 390
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50 Identity = 103/202 (50.99%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRY 429
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50 Identity = 104/202 (51.49%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VRD FQ+A+ K CIIF DE+DAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPAL+R GRLDRK+E P E RA I IH++ M+ D+ FE LAR + GA +++VC EAGM A+R V+ +DF E I I+ AK A+ Y Sbjct: 223 AVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSATSRY 424
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50 Identity = 96/194 (49.48%), Postives = 134/194 (69.07%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A A+Q + F K+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+AR IL+IH+ +T H ++++E + + +D FNGA L VC EAGM A+R D V EDF + + +V KK Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 197.593 bits (501), Expect = 4.780e-50 Identity = 103/202 (50.99%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 4.780e-50 Identity = 103/202 (50.99%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429 The following BLAST results are available for this feature:
BLAST of CN188501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188501 ID=CN188501; Name=CN188501; organism=Citrus sinensis; type=EST; length=661bpback to top |