CN188501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 4.780e-50 Identity = 103/202 (50.99%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 4.780e-50 Identity = 103/202 (50.99%), Postives = 133/202 (65.84%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F ++ G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.065e-49 Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 557 A A +T+A F G LVQ +IG+GA+LVR+ F LAKEK+P I+FIDEIDAIG R ++ SGDREVQRT+++LL +DGF +K+I ATNR DILD AL+R GR DR IE+P P E R IL++H+R M + DV+ E+AR T+ NGA+L A+C+EAGM A+R++ +V+ EDF Sbjct: 206 AVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDF 387
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.065e-49 Identity = 100/193 (51.81%), Postives = 134/193 (69.43%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 A A T+ TF +++G LVQ +IG+G+K+VR+ F +A+E +P IIF+DEID+IG+ R + + GD EVQRTMLELLNQLDGF S IK+I ATNR DILDPAL+R GR+DRKIE P+P+E AR IL+IHSR+M + +N ++A +GA++KA C EAGM ALR V ED + +V + Sbjct: 209 AVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKR 401
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 1.065e-49 Identity = 103/202 (50.99%), Postives = 132/202 (65.35%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 608 A A +T+A F + G LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R +DF E +I+ AK A+ Y Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.391e-49 Identity = 99/186 (53.23%), Postives = 129/186 (69.35%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 569 A A QT A F ++ G LVQ +IG+GA+LVR+ F+LAK+KSP IIFIDEIDAIG R +S SGDREV RT+++LL ++DGFS+ +++I ATNR DILD AL+R GR DR IE+P P E R IL IH M + V+ ++A TD NGA L+++C+EAGM A+R D V EDF + I Sbjct: 206 AVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSI 391
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.391e-49 Identity = 96/189 (50.79%), Postives = 130/189 (68.78%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578 A A +T+A F ++ G LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E+R +I +IH+R M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 220 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 408
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.391e-49 Identity = 96/189 (50.79%), Postives = 130/189 (68.78%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578 A A +T+A F ++ G LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E+R +I +IH+R M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.817e-49 Identity = 96/189 (50.79%), Postives = 129/189 (68.25%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578 A A +T+A F ++ G LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E R +I +IH+R M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.817e-49 Identity = 96/189 (50.79%), Postives = 129/189 (68.25%), Query Frame = 3 Query: 12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578 A A +T+A F ++ G LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E R +I +IH+R M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409 The following BLAST results are available for this feature:
BLAST of CN188501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188501 ID=CN188501; Name=CN188501; organism=Citrus sinensis; type=EST; length=661bpback to top |