CN188501

Overview
NameCN188501
Unique NameCN188501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2137 contig Csv1_Contig2137:697..1357. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.474e-48
Identity = 98/200 (49.00%), Postives = 127/200 (63.50%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 611
            A A  T A F ++ G   VQ ++G+G ++VRD F+LAKE SP IIFIDEIDAI TKRFD++   DREVQR +LELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIE P P    +  I    + KM +  +V+ EE     D  +GA + A+C EAGM A+R +   V  +DF +G      K ++   +Y
Sbjct:  215 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKDESEYEFY 414          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A A ++NA F  +      Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF+  D +K+IAATNR DILDPAL+R GR DR IE+P P    R  I  I+ +KM V  ++N E L++ ++ F+GA +K VCVEA  +A+R    +V  +D  + I ++  K+
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKR 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A A ++NA F  +      Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF+  D +K+IAATNR DILDPAL+R GR DR IE+P P    R  I  I+ +KM V  ++N E L++ ++ F+GA +K VCVEA  +A+R    +V  +D  + I ++  K+
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKR 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A A ++NA F  +      Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF+  D +K+IAATNR DILDPAL+R GR DR IE+P P    R  I  I+ +KM V  ++N E L++ ++ F+GA +K VCVEA  +A+R    +V  +D  + I ++  K+
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKR 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A A ++NA F  +      Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF+  D +K+IAATNR DILDPAL+R GR DR IE+P P    R  I  I+ +KM V  ++N E L++ ++ F+GA +K VCVEA  +A+R    +V  +D  + I ++  K+
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKR 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A A ++NA F  +      Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF+  D +K+IAATNR DILDPAL+R GR DR IE+P P    R  I  I+ +KM V  ++N E L++ ++ F+GA +K VCVEA  +A+R    +V  +D  + I ++  K+
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKR 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 7.632e-48
Identity = 97/192 (50.52%), Postives = 128/192 (66.67%), Query Frame = 3
Query:    3 VRGACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578
            V  A A +T A F ++ G  LVQ +IG+GA++VR+ FQ+A+ K  CI+F DEIDAIG  RFD  V  D EVQRTMLE+L QLDGF +   IKV+ ATNR DILDPAL+R GRLDRK+E   P  E R +I +IH+R M+   D+ FE LA    +  GA +++VC+EAGM A+      V  +DF + + +V
Sbjct:  255 VARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKV 446          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.968e-48
Identity = 97/189 (51.32%), Postives = 133/189 (70.37%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578
            A A + NATF ++ G  LV+ FIG+GA+LV + F+LAKEK+P IIFIDEIDAIG KR D    G+REV RT+++LL ++DGF     +K+IAATNR DILDPAL+R GR DR IE+P P+ ++R  IL+IH+++M +   V+   +A  T+  +GA LKA+ +EAGM A+R     V  EDF + I +V
Sbjct:  192 ALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKV 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.968e-48
Identity = 92/193 (47.67%), Postives = 131/193 (67.88%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A A ++NA F  +      Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF+  D +K+IAATNR DILDPAL+R GR DR IE+P P    R  I  I+ +KM V  ++N E L++ ++ F+GA +K VCVEA  +A+R    +V  +D    I ++  K+
Sbjct:  187 AVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKINVKR 379          
BLAST of CN188501 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.302e-47
Identity = 98/202 (48.51%), Postives = 135/202 (66.83%), Query Frame = 3
Query:   12 ACAAQTNATFFKIAGPLLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL---RRDATEVNHEDFNEGIIQVQAKKKASLNY 608
            A A +T+ATF ++ G  LVQ ++G+GA++VR+ F++A+ K  CIIF DEIDAIG  RFD    GD EVQRTMLEL+ QLDGF     IKV+ ATNR + LD ALMR GR+DRK+E   P  E RA IL+IH++ M +  D+ +E +AR      GA+L++VC EAGM A+   RR ATE +  D  + +++   K  ++ +Y
Sbjct:  232 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433          
The following BLAST results are available for this feature:
BLAST of CN188501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PRS6B_MANSE4.474e-4849.0026S protease regulatory subunit 6B OS=Manduca sext... [more]
PSMR_SULIY5.844e-4847.67Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM5.844e-4847.67Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL5.844e-4847.67Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIK5.844e-4847.67Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIA5.844e-4847.67Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PRS7B_ARATH7.632e-4850.5226S protease regulatory subunit 7 homolog B OS=Ara... [more]
PSMR_THEON9.968e-4851.32Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_SULIN9.968e-4847.67Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PRS7_SCHPO1.302e-4748.5126S protease regulatory subunit 7 homolog OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188501 ID=CN188501; Name=CN188501; organism=Citrus sinensis; type=EST; length=661bp
CCGTAAGAGGTGCTTGTGCAGCACAAACAAATGCTACCTTCTTTAAAATC
GCAGGCCCTCTTCTAGTCCAGATGTTCATTGGAGATGGAGCCAAACTAGT
TCGTGATGCCTTTCAACTTGCAAAGGAGAAGTCCCCCTGCATTATTTTCA
TCGACGAAATTGACGCAATTGGTACAAAGCGGTTTGACAGTGAAGTGAGT
GGAGACAGGGAGGTGCAGCGAACTATGTTAGAGTTGCTCAATCAGCTCGA
TGGATTTAGCAGCGATGATCGGATTAAGGTCATAGCAGCAACAAATCGTG
CTGATATCCTGGACCCTGCTCTTATGCGATCTGGCCGTTTGGATCGCAAG
ATCGAGTTACCACATCCGAGTGAGGAAGCTAGAGCTCGCATTTTGCAAAT
CCATTCGAGGAAGATGACTGTTCACCCGGATGTCAACTTCGAAGAACTTG
CTCGATCCACTGACGATTTCAATGGGGCACAACTAAAAGCTGTTTGTGTT
GAAGCAGGGATGCTTGCTCTTCGCCGTGATGCGACTGAGGTCAACCATGA
GGATTTCAATGAAGGTATCATTCAGGTGCAGGCTAAGAAAAAGGCTAGCT
TAAACTACTATGCATAGACACATCCAAAGGCGAAGTTTTAGCCTCTACTT
CAATTGGTAAT
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