CN188497

Overview
NameCN188497
Unique NameCN188497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.842e-37
Identity = 84/156 (53.85%), Postives = 101/156 (64.74%), Query Frame = -1
Query:  281 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 745
            VLAA YKA+ DHHV LEGTLLKPNMVTPG   P K + E +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  209 VLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.700e-36
Identity = 83/156 (53.21%), Postives = 105/156 (67.31%), Query Frame = -1
Query:  281 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 745
            V A  +  L  ++V+ EG LLKP+MVTPG+EA  + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  247 VWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.787e-36
Identity = 80/156 (51.28%), Postives = 108/156 (69.23%), Query Frame = -1
Query:  281 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 745
            V A  +  + +++V+ EG LLKP+MVTPG+E   + TPE ++++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  236 VWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.436e-36
Identity = 86/156 (55.13%), Postives = 107/156 (68.59%), Query Frame = -1
Query:  281 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTP-EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 745
            VLA+ +KAL+D+ VLLEG  LKPNMVT G +  + T  + I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  205 VLASVFKALHDNGVLLEGASLKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35
Identity = 80/156 (51.28%), Postives = 103/156 (66.03%), Query Frame = -1
Query:  281 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 745
            V A  +  L  ++V+ EG LLKP+MVTPG+E+  + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  246 VWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35
Identity = 82/156 (52.56%), Postives = 104/156 (66.67%), Query Frame = -1
Query:  281 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 745
            V A  +  L +++V  EG LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  204 VWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.218e-34
Identity = 77/148 (52.03%), Postives = 101/148 (68.24%), Query Frame = -1
Query:  281 LNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 721
            L  ++V+ EG LLKP+MVTPG+E   K +PE +A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  247 LAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.118e-33
Identity = 76/143 (53.15%), Postives = 97/143 (67.83%), Query Frame = -1
Query:  320 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 745
            V A  +  L +++V  EG LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  198 VWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.684e-33
Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = -1
Query:  281 LLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 688
            LLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN188497 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = -1
Query:  416 HHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 712
            H++ LEGTLLKPNMVT G   PK  TPE IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN188497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDCA_DANRE5.842e-3753.85Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALFC1_ARATH1.700e-3653.21Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ3.787e-3651.28Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALF2_PLABA8.436e-3655.13Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALFC2_ARATH2.455e-3551.28Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA2.455e-3552.56Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH1.218e-3452.03Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA5.118e-3353.15Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOC_CHICK6.684e-3353.28Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF_LYMST1.820e-3067.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C14_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188497 ID=CN188497; Name=CN188497; organism=Citrus sinensis; type=EST; length=745bp
AGGAAGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTT
AGCGCCATTAGGGGAAAAGGAAAAAAAAAAACAAAAACAAAAGCATAAAC
AGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGC
TTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAA
TGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACAT
GGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTA
CCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCT
GCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTC
TTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTT
GCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGA
GCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAG
AAGGACATGGTGGTCATTCAGAGCCTTGTAGCATGCAGCAAGAAC
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