CN188496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29 Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 3 Query: 591 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 M+L +WFY +LASLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT HPTSEEL+IG +F FDLGGHQ ARR+WKDY Sbjct: 1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDY 84
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.107e-29 Identity = 58/84 (69.05%), Postives = 70/84 (83.33%), Query Frame = 3 Query: 591 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 MF+ +WF+ +LASLGL K AK+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG +KF +DLGGH ARR+W+DY Sbjct: 1 MFIINWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDY 84
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28 Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 594 FLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 FL+DWF G+L LGL K+ K++FLGLDNAGKTTLLHMLKD+R+ QH PT HPTSE++S+G I F +DLGGH ARRVWKDY Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDY 85
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 3 Query: 591 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 M++ +WFY ILASLGL K AK+LFLGLDNAGKTTLLHMLK++R+ PT HPTSEEL IG +F FDLGGHQ ARR+WKDY Sbjct: 1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDY 84
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.528e-26 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVWK+Y Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.528e-26 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+F+W Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVWK+Y Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.528e-26 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+F+W Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVWK+Y Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.528e-26 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+F+W Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVWK+Y Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.528e-26 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+F+W Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVWK+Y Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVWK+Y Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNY 89 The following BLAST results are available for this feature:
BLAST of CN188496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188496 ID=CN188496; Name=CN188496; organism=Citrus sinensis; type=EST; length=843bpback to top |