CN188496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVWK+Y Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVWK+Y Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVWK+Y Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.311e-26 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVWK+Y Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25 Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 3 Query: 612 YGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 + +L+SLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT HPTSEELSIG +KF FDLGGH ARR+W+DY Sbjct: 4 WDVLSSLGLMNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDY 80
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25 Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 594 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 F+F+W Y +L LGL++K K++FLGLDNAGKTTLL MLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVWK+Y Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNY 89
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.448e-21 Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 603 DWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 DWF L+ LGL++K+A I+F+GLDNAGK+TLL MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W+ Y Sbjct: 5 DWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQY 84
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.029e-19 Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 591 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 MFL DWFY + LG ++KEAKI+ +GL NAGKTTLLH+L L H PT P +E + G + FKA+DLGG Q R +WK Y Sbjct: 1 MFLVDWFYNMFLWLGFFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQY 84
BLAST of CN188496 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 3 Query: 636 LWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDY 842 L+ K + ILFLG+DNAGKTTL++ LK + + PT HP++ + IG +K + DLGGH AR W+DY Sbjct: 31 LFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDY 99 The following BLAST results are available for this feature:
BLAST of CN188496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188496 ID=CN188496; Name=CN188496; organism=Citrus sinensis; type=EST; length=843bpback to top |