CN188494

Overview
NameCN188494
Unique NameCN188494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.872e-32
Identity = 85/235 (36.17%), Postives = 107/235 (45.53%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQ 710
            HTD+H IKN+ G + YP+                 + F              CR C  C    E YC   + + N     G  TQGGF++ MVV Q +VV++P  +  + AAPLLCAGVTV+SP+  +GL                       KA G  VTVISSS  KR EA+  LGAD +L S D   M  AA ++D IIDTV A HPL P              G    P+Q
Sbjct:   46 HTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQ 280          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.342e-30
Identity = 79/219 (36.07%), Postives = 107/219 (48.86%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG------MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP 644
            H+D+  IKN+ G + YP+                 + F              CR C  C    E YC   + S+N    DG    GGF+E  VV+Q++VV+IP G        L++ APLLCAGVTV+ P+   GL +                     KA G  VTVIS+S  K  EA+E LGAD +L+S++A +M+ AA ++D IIDTV A H L P
Sbjct:   46 HSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTP 264          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29
Identity = 78/237 (32.91%), Postives = 114/237 (48.10%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ-AAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS-DKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQ 710
            HTD+H  KND G S YP                    +              CR+C+ C  ++E YC K I +  D + DG  T GG+++SMVVD+ FV +IP+G+ L+   +  LC G +  SPL ++GL +                    AK  G  +TVIS+S   K+ EA+++LGAD +LVS D  +M+   ++LD IIDTV A+H + P              G I  P++
Sbjct:   52 HTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLE 287          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29
Identity = 61/162 (37.65%), Postives = 94/162 (58.02%), Query Frame = 3
Query:  162 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY 647
            C++C  C + +E +C+K + +YN V +DG  T+GG++  ++V Q++  KIP    L +AAPLLCAG+TV++P+    + Q                     KA G  VTV S+S+ KR EA+  LGAD +++SSD  +M+    SL +IIDT   +H  +PY
Sbjct:  100 CQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDTASGDHQFDPY 261          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 75/235 (31.91%), Postives = 111/235 (47.23%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPM 707
            H+DIH +K + G  NYP+                 + +              CR C  C   +EQYC     ++YN +  DG+PTQGG++E++VVD+ +V++IPD + L+ AAPLLCAG+T++SPL H+    +                   A AMG  VTV+S S KK  + +  LGA  Y  ++D    ++     D I++TV AN  L  Y             G+   PM
Sbjct:   42 HSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTRVAIIGLGGLGHMGVKLGA-AMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPM 274          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 75/235 (31.91%), Postives = 111/235 (47.23%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPM 707
            H+DIH +K + G  NYP+                 + +              CR C  C   +EQYC     ++YN +  DG+PTQGG++E++VVD+ +V++IPD + L+ AAPLLCAG+T++SPL H+    +                   A AMG  VTV+S S KK  + +  LGA  Y  ++D    ++     D I++TV AN  L  Y             G+   PM
Sbjct:   42 HSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTRVAIIGLGGLGHMGVKLGA-AMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPM 274          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 76/247 (30.77%), Postives = 116/247 (46.96%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG--------MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLT 719
            H+D+H IKN+   + YP+                 + F              C  C  C    E YC+  + ++YN V  DG  T GG+++++VV Q+FVV+ P          + L+  APLLCAGVTV++P+   GL ++                   A+A G  VTVIS+S  KR EA+E LGAD ++VS++A+ M+ A  ++  II+T  A+  +  Y             G+   P+Q  T
Sbjct:   61 HSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPT 307          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.093e-27
Identity = 65/214 (30.37%), Postives = 100/214 (46.73%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY 647
            + D+   +N  G S YP+                   F              CR C  C    E  C K ++++N +  DG  T+GG++  +VV +++  KIP    LE AAPLLCAG+TV++P+    + Q                     KA G  VTV S+S  K+ EA+  LGA+ +++SSD  +M+    SLD+++DT   +H  +PY
Sbjct:   49 YADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDTASGDHAFDPY 262          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 70/215 (32.56%), Postives = 101/215 (46.98%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY 647
            H+DIH   ++ G   +PM                 +                C  C  C    EQ+C K +  +YN V  DG PT GG+++ +VV  +FVV+IPD + ++ A+PLLCAG+T +SPL H+ +                      A AMG  VTV+S S  K+ EA+E LGA+ Y  +SD       A   D I++TV AN  ++ Y
Sbjct:   45 HSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVGPG-KKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSANLDVDAY 257          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.066e-19
Identity = 65/235 (27.66%), Postives = 102/235 (43.40%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP-TQGGFAESMVVDQKFVVKIPDGMA-LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTP 704
            H+D+HQ++++   + YP                    +              C++C  CE  +E YC+    +YN    D    T GG+++ +VV +++V++I      L   APLLCAG+T +SPL H+                        A AMG HV   ++S+ KR EA + LGAD+ + S +A  M     S D+I++TV A H L+ +             G   TP
Sbjct:   41 HSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKL-AHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP 273          
The following BLAST results are available for this feature:
BLAST of CN188494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CAD8D_ORYSJ1.872e-3236.17Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH9_ORYSJ1.342e-3036.07Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
MTDH3_STYHU3.305e-2932.91Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH4_ORYSJ3.305e-2937.65Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
ADHC_MYCTU4.316e-2931.91NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO4.316e-2931.91NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
CADH7_ORYSJ2.142e-2830.77Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH1_ARATH3.093e-2730.37Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHA_BACSU6.450e-2532.56Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI1.066e-1927.66Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188494 ID=CN188494; Name=CN188494; organism=Citrus sinensis; type=EST; length=732bp
GCAGTCACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAAC
TATCCAATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGG
TTCAGAAGTGAGCAACTTTAAAGTAGGAGACAAGGTTGGTGTTGGGGTTC
TCGTTGGTTGTTGCAGAAACTGCAGGCCGTGCGAGGCAGATGTTGAGCAG
TACTGCAACAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAA
GCCTACACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTG
TGGTGAAAATACCAGATGGAATGGCACTGGAGCAGGCGGCACCGCTATTG
TGTGCTGGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCA
GAGCGGGCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGCCACATGG
GGGTTTTGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCT
TCTGATAAGAAAAGAGTGGAAGCTATGGAGCATCTTGGTGCCGATCAGTA
CCTTGTCAGCTCCGACGCAACTCGTATGCAAGAAGCCGCTGACTCACTTG
ATTATATCATTGATACCGTACCCGCAAATCACCCTCTGGAGCCTTACCTT
TCGCTGTTGAAGCTTGATGGAAAGTTGATCTTGACGGGTGTCATTAACAC
TCCCATGCAGTTTCTTACCCCTATGGTTATGC
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