CN188493

Overview
NameCN188493
Unique NameCN188493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:606..1342. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.083e-63
Identity = 128/189 (67.72%), Postives = 141/189 (74.60%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+ PL  FGLKQS                  IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDY+ DT+P  HPLEPY           LTGVIN P+QF++PMVML  ++ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  168 VYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVML--ESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 354          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.264e-60
Identity = 121/188 (64.36%), Postives = 139/188 (73.94%), Query Frame = -1
Query:  174 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SPLSHFGL  S                  IAKAMGHHVTVISSSDKK+ EA+EHLGAD Y+VSSD   MQ  ADSLDYIIDTVP  HPL+PY           L GVINTP+QF+TP+V+LGRK I+GSFIGS+KET+E+L FC+EKG+TS IE +K+D +N AFERL KNDVRYRFVVDVAGS L
Sbjct:  169 VYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGSNL 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.815e-60
Identity = 120/189 (63.49%), Postives = 137/189 (72.49%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL HFGL                     +AKAMGHHVTVISSS KKR EAM+HLGAD YLVSSDA  M  AADSLDYIIDTVP +HPLEPY           L GVI  P+ F++PMVMLGRKAITGSFIGS+ ET E+L+FC +KG+TS IEV+KM YVN+A ERLE+NDVRYRFVVDVAGS ++
Sbjct:  168 VYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNVE 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.676e-60
Identity = 120/189 (63.49%), Postives = 137/189 (72.49%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL HFGL                     +AK+MGHHVTVISSS +KR EAM+ LGAD YLVSSDA  M  A DSLDYIIDTVP +HPLEPY           L GVIN P+ F++PMVMLGRKAITGSFIGSM ET+E+L FC +KG+TS IEV+KMDYVN+A ERLE+NDVRYRFVVDVAGS +D
Sbjct:  168 VYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNID 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.383e-59
Identity = 117/189 (61.90%), Postives = 136/189 (71.96%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL HFGL                     +AK+MGHHVTVISSSDKKR EAM+ LGAD YLVSSD  +M  A DSLDYIIDTVP  HPLEPY           L GVI  P+ F++PMVMLGRK ITGSFIGS++ET+E+L FC +KG+TS IEV+KMDY+N+A ERLE+NDVRYRFVVDVAGS +D
Sbjct:  169 VYSPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGSNID 357          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.183e-58
Identity = 118/189 (62.43%), Postives = 136/189 (71.96%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL  FGL                     +AKAMGHHVTVISSS KKR EAM+HLGAD YLVSSDA  M  AADSLDYIIDTVP +HPLEPY           L GVI  P+ F++PMVMLGRKAITGSFIGS+ ET E+L+FC +KG+TS IEV+KM YVN+A +RLE+NDVRYRFVVDVAGS ++
Sbjct:  168 VYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKHVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGSNVE 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.088e-55
Identity = 110/189 (58.20%), Postives = 134/189 (70.90%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            VFSP+ HF + +                   IAKA G HVTVISSSDKK+ EAME LGAD YLVS D  +M EAA+SLDYI+DT+P  HPLEPY           + GV+  P+ F+TP+++LGR++I GSFIGSM+ET+E L+FC EK V+SMIEV+ +DY+N A ERLEKNDVRYRFVVDVAGSKLD
Sbjct:  168 VFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGSKLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54
Identity = 108/189 (57.14%), Postives = 134/189 (70.90%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SP+ HFG+ +                   IAKA G HVTVISSSDKK+ EA+E LGAD YLVS DA +MQEAA+SLDYI+DT+P  HPLEPY           + GV+  P+ F+TP+++LGR++I GSFIGSM+ET+E L+FC EK V+SMIEV+ +DY+N A ERL KNDVRYRFVVDVA S LD
Sbjct:  168 VYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVAASNLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.937e-54
Identity = 108/189 (57.14%), Postives = 134/189 (70.90%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SP+ HFG+ +                   IAKA G HVTVISSSDKK+ EA+E LGAD YLVS DA +MQEAA+SLDYI+DT+P  HPLEPY           + GV+  P+ F+TP+++LGR++I GSFIGSM+ET+E L+FC EK V+SMIEV+ +DY+N A ERL KNDVRYRFVVDVA S LD
Sbjct:  168 VYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARSNLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.142e-54
Identity = 108/189 (57.14%), Postives = 132/189 (69.84%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            VFSP+ HF + +                   IAKA G HVTVISSSDKK+ EAME LGAD YLVS D  +M EAA+SLDYI+DT+P  HPLEPY           + GV+  P+ F+TP ++LGR++I GSFIG M+ET+E L+FC EK V+SMIEV+ +DY+N A ERLEKNDVRYRFVVDVAGS+LD
Sbjct:  168 VFSPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPPLILGRRSIAGSFIGGMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGSELD 356          
The following BLAST results are available for this feature:
BLAST of CN188493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH1_EUCGU2.083e-6367.72Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH4_ARATH1.264e-6064.36Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MAIZE2.815e-6063.49Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH2_ORYSJ3.676e-6063.49Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_LOLPR2.383e-5961.90Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH_SACOF1.183e-5862.43Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH_PINRA2.088e-5558.20Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH7_PICAB2.308e-5457.14Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB3.937e-5457.14Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH_PINTA5.142e-5457.14Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188493 ID=CN188493; Name=CN188493; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTAACACCTCAGCTTGTTTTTTTTTTTTTTCAATTTA
TTAGGAGAAATTGTAAACACGGAAGCCATACATGGTTAGGCCAACGACAA
AAGCATAAAAACCAAACAAGGCACTCAAAAAACAAAACGAGTATCATGCC
AAAATTGAATTTCTCTACGGATCAAGTTTGCTTCCGGCAACGTCCACGAC
GAATCTGTACCTAACGTCGTTCTTTTCGAGTCTCTCGAATGCTTTGTTAA
CGTAATCCATCTTGATCACTTCAATCATGGAGGTGACTCCCTTCTCTCGG
CAGAATTCAAGCATTTCCTTTGTCTCCTTCATGCTCCCAATGAAGCTCCC
CGTGATTGCCTTTCTCCCAAGCATAACCATAGGGGTAAGAAACTGCATGG
GAGTGTTAATGACACCCGTCAAGATCAACTTTCCATCAAGCTTCAACAGC
GAAAGGTAAGGCTCCAGAGGGTGATTTGCGGGTACGGTATCAATGATATA
ATCAAGTGAGTCAGCGGCTTCTTGCATACGAGTTGCGTCGGAGCTGACAA
GGTACTGATCGGCACCAAGATGCTCCATAGCTTCCACTCTTTTCTTATCA
GAAGAGCTAATCACAGTAACATGGTGTCCCATCGCCTTAGCTATCAAAAC
CCCCATGTGGCCTACTCCTCCGAGCCCCAAGATTCCTCCTCTCAGCCCGC
TCTGCTTCAATCCAAAGTGGCTCAGGGGACTGAACAC
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