CN188493

Overview
NameCN188493
Unique NameCN188493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:606..1342. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36
Identity = 84/188 (44.68%), Postives = 111/188 (59.04%), Query Frame = -1
Query:  174 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SP+   GL                      AKA G  VTVIS+S  KR EA+EHLGAD++LVS DA +M  AA ++D I++TV A HP+ P              G    P++     ++ G K ITG+ +G +++ + ML+F  E G+T+ +EVIKMDYVN A ERLEKNDVRYRFV+DVAGS L
Sbjct:  241 VYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSSL 428          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 84/188 (44.68%), Postives = 111/188 (59.04%), Query Frame = -1
Query:  174 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SP+   GL                      AKA G  VTVIS+S  KR EA+EHLGAD++LVS DA +M  AA ++D I++TV A HP+ P              G    P++     ++ G K ITG+ +G +++ + ML+F  E G+T+ +EVIKMDYVN A ERLEKNDVRYRFV+DVAGS L
Sbjct:  244 VYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFVGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSSL 431          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 81/190 (42.63%), Postives = 113/190 (59.47%), Query Frame = -1
Query:  168 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 737
            V+SP+ ++G+ ++                  I KA G  VTVISSS  K  EA+ HLGAD +LV++D  +M+ A  ++DYIIDT+ A H L P              G+   P++     ++LGRK + GS +G MKET+EML+FC +  +T+ IE+IKMD +N A ERL K+DVRYRFV+DVA S   P
Sbjct:  171 VYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLSPP 360          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35
Identity = 81/185 (43.78%), Postives = 113/185 (61.08%), Query Frame = -1
Query:  180 FSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 734
            +SPL + GL +                   +AKA G HVTVIS+S+ K+ EA+E LGAD++LVSSD+ +MQ A  +L  IIDTV A HP+ P            + G    P++     +++GRK + GS IG +KET+EML+F  +  +T+ +EVI +DYVN A ERL K+DVRYRFV+DVA +
Sbjct:  149 YSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANT 333          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = -1
Query:  180 FSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 734
            +SPL +FGL +                    AKAMG  VTVIS+S KK  EA++HLGAD +LVS D  +MQ A  ++D IIDTV A HPL P            + G    P++     +++GRK + GS IG MKET+EM++F     +T+ IEVI +DY+N A ERL K DVRYRFV+D+  +
Sbjct:  170 YSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNT 354          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 79/185 (42.70%), Postives = 108/185 (58.38%), Query Frame = -1
Query:  180 FSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 734
            +SPL ++GL +                   +AKA G  VTVI  S+ KR EA+E LGAD +L++SD  +M+ A  SLD IIDTVP NHPL P            + G    P +     ++ GRK + G+  G +KET+EML+F  +  +T+ +EVI MDYVN A ERL K+DVRYRFV+D+A +
Sbjct:  172 YSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANT 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 82/189 (43.39%), Postives = 114/189 (60.32%), Query Frame = -1
Query:  174 VFSPLSHFGL-KQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SP+ ++G+ K+S                  I KA G  VTVIS S +K  EA++ LGAD +LV++D+ +M+EA  ++D+IIDTV A H L P              G++  P+      ++LGRK + GS IG MKET+EMLEFC +  + S IE+IKM  +N A +RL K+DVRYRFV+DVA S L
Sbjct:  165 VYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSLL 353          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34
Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = -1
Query:  174 VFSPLSHFGL-KQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SP+ ++G+ K+S                  I KA G  VTVIS S +K  EA++ LGAD +LV++D+ +M+EA  ++D+IIDTV A H L P              G+   P+      ++LGRK + GS IG MKET+EMLEFC +  + S IE+IKM  +N A +RL K+DVRYRFV+DVA S L
Sbjct:  166 VYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSLL 354          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 81/186 (43.55%), Postives = 106/186 (56.99%), Query Frame = -1
Query:  180 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 737
            V+SPL HF L +                     KA G  VTVIS+S  K+ EA+  LGAD ++VS +  +MQ A  +LD IIDTV A HPL P            + GV + P++     ++ GRK + GS IG MKET+EM++F  +  + S IEV+ MDYVN A ERL K DVRYRFV+DVA +
Sbjct:  172 VYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANT 357          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = -1
Query:  180 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 737
            V+SP+ ++G+ +                     KA G  VTVIS+S  K  EA++ LGAD +LVS D  +M+ A  ++DYIIDT+ A H L P              G+ + P++     ++ GRK I GS IG MKET+EML+FC +  +T+ IE+IKM  +N A ERL K DV+YRFV+DVA S
Sbjct:  170 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANS 355          
The following BLAST results are available for this feature:
BLAST of CN188493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CAD8B_ORYSJ2.170e-3644.68Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ3.702e-3644.68Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CADH9_ARATH8.247e-3642.63Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_PETCR1.077e-3543.78Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH_FRAAN3.134e-3543.78Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_APIGR1.191e-3442.70Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH3_ARATH1.191e-3443.39Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH2_ARATH2.653e-3443.39Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH_MESCR1.720e-3343.55Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_MEDSA1.720e-3341.40Probable mannitol dehydrogenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188493 ID=CN188493; Name=CN188493; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTAACACCTCAGCTTGTTTTTTTTTTTTTTCAATTTA
TTAGGAGAAATTGTAAACACGGAAGCCATACATGGTTAGGCCAACGACAA
AAGCATAAAAACCAAACAAGGCACTCAAAAAACAAAACGAGTATCATGCC
AAAATTGAATTTCTCTACGGATCAAGTTTGCTTCCGGCAACGTCCACGAC
GAATCTGTACCTAACGTCGTTCTTTTCGAGTCTCTCGAATGCTTTGTTAA
CGTAATCCATCTTGATCACTTCAATCATGGAGGTGACTCCCTTCTCTCGG
CAGAATTCAAGCATTTCCTTTGTCTCCTTCATGCTCCCAATGAAGCTCCC
CGTGATTGCCTTTCTCCCAAGCATAACCATAGGGGTAAGAAACTGCATGG
GAGTGTTAATGACACCCGTCAAGATCAACTTTCCATCAAGCTTCAACAGC
GAAAGGTAAGGCTCCAGAGGGTGATTTGCGGGTACGGTATCAATGATATA
ATCAAGTGAGTCAGCGGCTTCTTGCATACGAGTTGCGTCGGAGCTGACAA
GGTACTGATCGGCACCAAGATGCTCCATAGCTTCCACTCTTTTCTTATCA
GAAGAGCTAATCACAGTAACATGGTGTCCCATCGCCTTAGCTATCAAAAC
CCCCATGTGGCCTACTCCTCCGAGCCCCAAGATTCCTCCTCTCAGCCCGC
TCTGCTTCAATCCAAAGTGGCTCAGGGGACTGAACAC
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