CN188487

Overview
NameCN188487
Unique NameCN188487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19
Identity = 64/219 (29.22%), Postives = 106/219 (48.40%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPN--ATLGWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            +N++ SC +  ++K+ + T+S   V      +    V DET  SD +     K+  W Y +SK LAE A  + AKE +ID ++I P +V+GP + PT   S    LS I G + + +      +V++ D+   HI  FE P A GRY           +   + E +P + +P++       +P    S +K   +G  F   LE  ++  I++ +EKG
Sbjct:  120 LNIIKSCVQAKTVKKFIFTTSGGTVNVEEHQKP---VYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIKQCQYVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFEGIDKDIPVVSFSSKKMIGMGFIFKYTLEDMVRGAIDTCREKG 335          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18
Identity = 61/219 (27.85%), Postives = 110/219 (50.23%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPN--ATLGWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            ++++ +C +  ++KR+V TSS  +V    +PR      D+  +SD + C++ K+  W Y +SK LAE AA ++A E  +D ++I P +V+GP L   +  S    L+LI G + + +    +  V++ D+ +A    FE P A+GRY           L   + + +P +++P+K A     +     S +K  + G  F    E      I + ++KG
Sbjct:  108 LSIMRACKEAGTVKRIVFTSSAGSVNIEERPRP---AYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKG 323          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15
Identity = 65/218 (29.82%), Postives = 109/218 (50.00%), Query Frame = -3
Query:  178 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNATLG-WVNVKDVANAHIQAFEVPSASGRY-CLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEK 813
            ++++ SCAK  ++KR+V TSS   +      +   +  DET +SD +     K+  W Y +SK LAE AA + A++ +ID ++I P +V+GP +  T   S    LSLI     Y     G +V++ D+  AHI  +E P A GR+ C     + Y  +   V + +P + +P +       +     S +K  ++  +F   LE   K  IE+ ++K
Sbjct:  120 LSIIESCAKANTVKRLVFTSSAGTLDVQEDQK---LFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPSLITALSLI--TAHYGIIKQGQYVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIYD-VAKMVRQKWPEYYVPTEFKGIDKDLALVSFSSKKLMDIKFQFKHTLEDMYKGAIETCRQK 331          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15
Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = -3
Query:  478 VNVLNSCAKFPSIKRVVLTSSMAA--VAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTY 813
            ++++ +C K  +++R++ TSS     V  + KP     + DE+ +SD E C++ K+  W Y +SKTLAE  AWKFAKE  +D++TI P +V+GP L PT+  S    LS I G + +
Sbjct:   91 LDIMKACLKAKTVRRLIYTSSAGTLNVTEDQKP-----LWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPTMPPSLITALSPITGNEAH 202          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: YKJ7_SCHPO (Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe GN=SPAC513.07 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13
Identity = 65/227 (28.63%), Postives = 109/227 (48.02%), Query Frame = -3
Query:  178 TVNVLNSCAKFPSIKRVVLTSSMAAVA-YNGKPRTPDVVVDETW----FSDPEVCKQSKLWYVLSKTLAEDAAWKFAKEK--SIDMVTINPAMVIGPLLQP-----TLNTSAAAVLSLIKGAQTYPNATLGWVNVKDVANAHIQAFE-VPSASGRYCLVERVLHYSKLVNTVHELYPT-FELPEKCADDKPYVPTYQVSKEKAKNLGIEFIPLEVSLKETIESLKEK 816
            T+ +L +     SIKR+V+TSS AAV  +   P    V  ++ W    + +        + Y  SK LAE+AA ++ KEK  S D+ TINP  V GP + P     +LNTS      LI G++        +V+V+DVA AH+ A E    ++GR  + + V     +   + + +P   ++  +  D       +++    +K+LG ++   E    +T + L E+
Sbjct:  105 TLGILEAAQGVKSIKRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGPPIHPMKNMDSLNTSNQIFWKLIDGSKEATPFYYYYVDVRDVAAAHVFALENAKLSNGRMLVSKGVFTTGDICKVLRKEFPNKSDVIAEPVDITVDPSFFKLDNSFSKSLGFKYHSDEECYVDTAKKLWER 331          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: YGD9_YEAST (Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae GN=YGL039W PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13
Identity = 69/223 (30.94%), Postives = 115/223 (51.57%), Query Frame = -3
Query:  181 SIKRVVLTSSMAAVAYNGKPR-TPDVVVDETWFSDP-EVCKQSKLW-YVLSKTLAEDAAWKFAKEKS----IDMVTINPAMVIGPLL-----QPTLNTSAAAVLSLI--KGAQTYPNATLGWVNVKDVANAHIQAFEVPSASG-RYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSK-------EKAKN-LGIEFIPLEVSLKETIESLKE 780
            ++++VV+TSS+AA+A  G  + T  VV +E+W  D  E C+ + +  Y  SK  AE  AW F +E        + TINP  V GP L     +  +N+S+A + +L+  K    + N +  +++V+DV+ AH+ AFE P  +G R  L E +    + ++ ++E +P  +L  K A  +P   +  ++K        K KN LG +F      + +T   L E
Sbjct:  123 TVEKVVITSSVAALASPGDMKDTSFVVNEESWNKDTWESCQANAVSAYCGSKKFAEKTAWDFLEENQSSIKFTLSTINPGFVFGPQLFADSLRNGINSSSAIIANLVSYKLGDNFYNYSGPFIDVRDVSKAHLLAFEKPECAGQRLFLCEDMFCSQEALDILNEEFP--QLKGKIATGEPGSGSTFLTKNCCKCDNRKTKNLLGFQFNKFRDCIVDTASQLLE 343          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: YGP7_YEAST (Putative uncharacterized oxidoreductase YGL157W OS=Saccharomyces cerevisiae GN=YGL157W PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.406e-12
Identity = 69/238 (28.99%), Postives = 116/238 (48.74%), Query Frame = -3
Query:  181 TVNVLNSCAKFPS--IKRVVLTSSMAAVAYNGKPRTPDVVV-DETWFSDP-EVCKQSKLW-YVLSKTLAEDAAWKFAKEKS----IDMVTINPAMVIGPL-----LQPTLNTSAAAVLSLIK---GAQTYPNATLGWVNVKDVANAHIQAFEVPSASG-RYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKA--------KNLGIEFIPLEVSLKETIESLKE 816
            T ++L +  K+ +  +++V++TSS AA+         D+V+ +E+W  D  + C+ + +  Y  SK  AE  AW+F KE        + TINP  V GP      L+  +NTS+  V  LI    G + Y N    +++V+DV+ AH+ A E P  +G R  L E +    ++V+ ++E +P  +L  K A  +P      + K           K LG +F  L+  + +T   + E
Sbjct:  108 TKSILEAIKKYAADTVEKVIVTSSTAALVTPTDMNKGDLVITEESWNKDTWDSCQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLSTINPGFVFGPQMFADSLKHGINTSSGIVSELIHSKVGGEFY-NYCGPFIDVRDVSKAHLVAIEKPECTGQRLVLSEGLFCCQEIVDILNEEFP--QLKGKIATGEPATGPSFLEKNSCKFDNSKTKKLLGFQFYNLKDCIVDTAAQMLE 342          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: YD541_YEAST (Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae GN=YDR541C PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = -3
Query:  379 TVNVLNSCAKFPS--IKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDP--EVCKQSKL-WYVLSKTLAEDAAWKFAKEKS----IDMVTINPAMVIGPLL-----QPTLNTSAAAVLSLIKGA--QTYPNATLGWVNVKDVANAHIQAFEVPSASGRYCLV 816
            T N+LNS  K+ +  ++RVV+TSS  A+    K   P VV  E  +++   E C+   +  Y  SK  AE AAW+F KE        + T+NP+++ GP L        LNTS   +  LI      + P+    +++V+DVA AH+ AF+  + +G+  +V
Sbjct:  106 TKNILNSIKKYAADTVERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKENEDHIKFKLTTVNPSLLFGPQLFDEDVHGHLNTSCEMINGLIHTPVNASVPDFHSIFIDVRDVALAHLYAFQKENTAGKRLVV 267          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: GRE2_YEAST (NADPH-dependent methylglyoxal reductase GRE2 OS=Saccharomyces cerevisiae GN=GRE2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11
Identity = 71/232 (30.60%), Postives = 106/232 (45.69%), Query Frame = -3
Query:  193 VLNSCAKFP--SIKRVVLTSSMAAVAYNGKPRTPDVVVDE------TWFSDPEVCKQSKL-WYVLSKTLAEDAAWKFAKEK----SIDMVTINPAMVIGPLL-----QPTLNTSAAAVLSL--IKGAQTYPNATLGWVNVKDVANAHIQAFEVPSASGRYCLV-ERVLHYSKLVNTVHELYPTFE------LPEKCADDKPYVPTYQVSKEKAKNLGIEFIPLEVSLKETIE 807
            +L+S  K+   S++RVVLTSS AAV    K     +  +E      TW    E C+   +  Y  SK  AE AAW+F +E       ++  +NP  V GP +     +  LNTS   V SL  +      P    G+++V+DVA AH+ AF+     G+  +V E       +++ ++E +P  +       P   A       T    K K K LG +F     +LKETI+
Sbjct:  107 ILHSIKKYAADSVERVVLTSSYAAVFDMAKENDKSLTFNEESWNPATW----ESCQSDPVNAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQMFDKDVKKHLNTSCELVNSLMHLSPEDKIPELFGGYIDVRDVAKAHLVAFQKRETIGQRLIVSEARFTMQDVLDILNEDFPVLKGNIPVGKPGSGATHNTLGATLDNKKSK-KLLGFKF----RNLKETID 329          
The following BLAST results are available for this feature:
BLAST of CN188487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DFRA_ANTMA1.291e-1929.22Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_HORVU1.428e-1827.85Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_SOLLC3.292e-1529.82Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_MEDSA7.333e-1539.32Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
YKJ7_SCHPO1.806e-1328.63Putative uncharacterized oxidoreductase C513.07 OS... [more]
YGD9_YEAST2.359e-1330.94Putative uncharacterized oxidoreductase YGL039W OS... [more]
YGP7_YEAST3.406e-1228.99Putative uncharacterized oxidoreductase YGL157W OS... [more]
YD541_YEAST7.589e-1233.33Putative uncharacterized oxidoreductase YDR541C OS... [more]
GRE2_YEAST8.390e-1130.60NADPH-dependent methylglyoxal reductase GRE2 OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188487 ID=CN188487; Name=CN188487; organism=Citrus sinensis; type=EST; length=818bp
CCTTTTGCTATGGAATTAATTGAAGCGAGAAAGTAGCATCATATTCTGAA
TCCATTAATAGCGGTAGTAACAAATTGAACGTTTGATCACACCAAAAGCC
ATGAGTCAGAACCGTTTATTTATGATAACGTATGAGGCTGTGAAAGAGCT
ACTCACGACTCAAAAATCAACAAACCCCTTCTCCTTTAGAGATTCAATGG
TTTCCTTGAGGCTGACCTCTAATGGGATGAACTCAATACCCAAGTTTTTC
GCTTTTTCCTTCGAAACCTGATATGTAGGAACATATGGCTTGTCGTCCGC
ACACTTTTCTGGAAGCTCAAAAGTAGGGTAAAGCTCGTGTACAGTGTTCA
CGAGTTTTGAATAGTGTAAAACTCTTTCAACTAAACAATATCGTCCACTG
GCAGATGGAACTTCAAATGCTTGAATATGTGCATTAGCAACATCTTTAAC
GTTAACCCATCCTAAAGTCGCATTTGGGTAAGTTTGTGCTCCTTTAATTA
AGCTTAGAACAGCAGCAGCACTTGTATTAAGTGTTGGCTGTAAGAGAGGA
CCGATAACCATTGCTGGGTTAATGGTGACCATGTCAATACTCTTCTCCTT
TGCAAATTTCCAAGCCGCATCCTCAGCCAATGTCTTTGAAAGCACATACC
AAAGCTTTGATTGCTTGCAAACCTCTGGATCCGAGAACCAAGTCTCATCA
ACTACCACATCAGGGGTTCGAGGTTTTCCGTTGTATGCAACTGCAGCCAT
TGAAGATGTTAAAACCACTCGTTTGATAGAAGGGAACTTTGCACATGAGT
TAAGAACATTAACAGTTC
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