CN188485
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.647e-41 Identity = 92/166 (55.42%), Postives = 113/166 (68.07%), Query Frame = -3 Query: 165 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRA----PSGVDDDLK----AWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXENQWAFE 632 +S KI L SSDGE+F+V+E VA + Q +KH++EDDC N IPL NVT ILS V+EYCKKHV+ DD + DD+ K AWD +F+K +D T+F LILAANYLN++ LL LTCQTVAD IK KTPEE+R+ FNI+NDFT EN WAFE Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = -3 Query: 165 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 620 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162 The following BLAST results are available for this feature:
BLAST of CN188485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188485 ID=CN188485; Name=CN188485; organism=Citrus sinensis; type=EST; length=697bpback to top |