CN188485
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.006e-40 Identity = 89/161 (55.28%), Postives = 114/161 (70.81%), Query Frame = -3 Query: 165 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFVKVDQAT-LFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 629 S KI LKSSDG++FE+DE VA +S I HM+ED CA + IPL NVTSKIL VI+YC+KHV++ + ++DLK WD DF+K + T LFD+++AANYLNI+SLLDLTC+TV AD++ GKTP+EIR FNI+ND T ENQWAF+ Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKSKE---------EEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40 Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = -3 Query: 174 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQW 620 + L+SSD + FE+++ +A S TIK+MIED +D+ IPLPNVTS IL KV++YC+ H + + + DD+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP EN+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40 Identity = 90/171 (52.63%), Postives = 114/171 (66.67%), Query Frame = -3 Query: 150 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV--EASKSDDRAPSGVD-------DDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE*KDLK 632 +S KI L SSD E+FEV+EAVA + + I HMI+DDCAD IPL NVT IL+ VIEYCKKHV + SDD + + ++L+ WD +F+K D T+ LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND+TP EN WAFE DLK Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE--DLK 170
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40 Identity = 86/152 (56.58%), Postives = 111/152 (73.03%), Query Frame = -3 Query: 174 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQW 620 + L+SSD + FE+++ +A S TIK+MIED +D IPLPNVTS IL KV++YC+ H + + + DD+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP EN+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39 Identity = 92/189 (48.68%), Postives = 113/189 (59.79%), Query Frame = -3 Query: 165 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVE----------------------ASKSDDRA-PSGVDDD---------LKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 632 +SKKI L SSDGE+F+V+E VA + Q + H+IEDDCA N IP+PNVT +IL+KVIEYCKKHVE K DD A P + D L WD F+K D T+FD+ILAANYLN++ L DL +T+AD IK TPEE+R+ FNI+NDFTP EN W FE Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.776e-37 Identity = 83/156 (53.21%), Postives = 101/156 (64.74%), Query Frame = -3 Query: 168 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAF 632 +S KI L SSDGE+FE+DEAVA + I HM+ED+CA IPL NVT ILSK+IEY K HV +D +L +WD F+ K+D T+F +ILAANYLN + LL QTVAD IK KTPEE+R+ FNI+NDFTP EN W F Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPSEEDE-DEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.319e-37 Identity = 82/156 (52.56%), Postives = 107/156 (68.59%), Query Frame = -3 Query: 165 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 632 ++KKI LKSS+G+ FE++E A + QTI HMIE +C DN I + +TS+IL VIEYC KH D A DDDL+ WD +F++ D++T+F L AAN+LN KSLL L QTVADMIKG TP+++R+ FNI+ND TP EN+WAFE Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKH-----HVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34 Identity = 78/156 (50.00%), Postives = 101/156 (64.74%), Query Frame = -3 Query: 171 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADN-GIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGV----DDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWA 623 KI L SSD E F VD+ +A S IK+M+ED N IPLPNV+S +L KV+E+C+ H S S + D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDFTP EN+WA Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = -3 Query: 168 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAF 632 +SKKI L SSD E FE+DEAVA + Q + HMI+DDCAD I L NVT KIL+ +IEYCKKHV+ ++ ++ WD +FVK +D TLF L+ AA+YL + L +L Q +AD KT EIR+ FNI+ND+TP +N+WAF Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHVDDVEA--------KNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
BLAST of CN188485 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.725e-28 Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 270 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAPSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 632 ++KKI LKSSDG+ FE++E A + QTI HMIE +C DN IP+ NVTS+IL VIEYC KH D A D+DLK WD +F++ DQ T+F L+ AA L+IKSLL L QTVADM+ Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKH-----HVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117 The following BLAST results are available for this feature:
BLAST of CN188485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188485 ID=CN188485; Name=CN188485; organism=Citrus sinensis; type=EST; length=697bpback to top |